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Bpifb5 Gene Detail
Summary
  • Symbol
    Bpifb5
  • Name
    BPI fold containing family B, member 5
  • Synonyms
    BC018465, MGC:27784
  • Feature Type
    protein coding gene
  • IDs
    MGI:2385160
    NCBI Gene: 228802
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:154065662-154082822 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 76.28 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    247 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2385160
 protein coding gene Chr2:154065662-154082822 (+)
129S1/SvImJ MGP_129S1SvImJ_G0026710
 protein coding gene Chr2:158942175-158960445 (+)
A/J MGP_AJ_G0026676
 protein coding gene Chr2:152555592-152572989 (+)
AKR/J MGP_AKRJ_G0026647
 protein coding gene Chr2:157037664-157054763 (+)
BALB/cJ MGP_BALBcJ_G0026686
 protein coding gene Chr2:152895708-152914013 (+)
C3H/HeJ MGP_C3HHeJ_G0026428
 protein coding gene Chr2:157407582-157424665 (+)
C57BL/6NJ MGP_C57BL6NJ_G0027135
 protein coding gene Chr2:163564917-163585606 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0024505
 protein coding gene Chr2:146148539-146165629 (+)
CAST/EiJ MGP_CASTEiJ_G0025889
 protein coding gene Chr2:157748271-157767410 (+)
CBA/J MGP_CBAJ_G0026407
 protein coding gene Chr2:169566235-169586692 (+)
DBA/2J MGP_DBA2J_G0026542
 protein coding gene Chr2:151807631-151825414 (+)
FVB/NJ MGP_FVBNJ_G0026508
 protein coding gene Chr2:150220228-150237186 (+)
LP/J MGP_LPJ_G0026647
 protein coding gene Chr2:159038495-159055140 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0026530
 protein coding gene Chr2:173592287-173609939 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0027190
 protein coding gene Chr2:156914957-156936545 (+)
PWK/PhJ MGP_PWKPhJ_G0025623
 protein coding gene Chr2:151367326-151384560 (+)
SPRET/EiJ MGP_SPRETEiJ_G0025426
 protein coding gene Chr2:155867743-155884981 (+)
WSB/EiJ MGP_WSBEiJ_G0025959
 protein coding gene Chr2:157832111-157849848 (+)



Homology
more
  • Human Ortholog
    BPIFB5P, BPI fold containing family B member 5, pseudogene
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    BPIFB5P, BPI fold containing family B member 5, pseudogene
  • Links
    NCBI Gene ID: 100505383

  • Chr Location
    chr20:33316869-33329969 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    709
  • Tissues
    1
  • cDNA Data
    38
  • Literature Summary
    2
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 228802 NCBI Gene Model | MGI Sequence Detail 17161 C57BL/6J ±  kb
transcript NM_144890 RefSeq | MGI Sequence Detail 1637 C57BL/6  
polypeptide NP_659139 RefSeq | MGI Sequence Detail 490 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR017943 Bactericidal permeability-increasing protein, alpha/beta domain superfamily
    IPR017942 Lipid-binding serum glycoprotein, N-terminal
Molecular
Reagents
less
  • All nucleic 38
    cDNA 38

    Microarray probesets 2
References
more
  • Summaries
    All 24
    Developmental Gene Expression 2
    Phenotypes 4
  • Earliest
    J:82808 Strausberg RL, et al., Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903
  • Latest
    J:274872 Ingham NJ, et al., Mouse screen reveals multiple new genes underlying mouse and human hearing loss. PLoS Biol. 2019 Apr;17(4):e3000194
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory