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Rrp36 Gene Detail
Summary
  • Symbol
    Rrp36
  • Name
    ribosomal RNA processing 36
  • Synonyms
    BC011248, MGC:19067
  • Feature Type
    protein coding gene
  • IDs
    MGI:2385053
    NCBI Gene: 224823
  • Alliance
    genome feature page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr17:46977249-46985252 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 17, 22.90 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    353 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2385053
 protein coding gene Chr17:46977249-46985278 (-)
129S1/SvImJ ENSMUSG00200025092
 protein coding gene Chr17:42177084-42183944 (-)
A/J ENSMUSG00195017513
 protein coding gene Chr17:43681825-43688729 (-)
AKR/J ENSMUSG00220032685
 protein coding gene Chr17:42675686-42682587 (-)
BALB/cJ ENSMUSG00180018655
 protein coding gene Chr17:43432005-43438911 (-)
C3H/HeJ ENSMUSG00175014472
 protein coding gene Chr17:42745908-42752809 (-)
C57BL/6NJ ENSMUSG00215014035
 protein coding gene Chr17:42301236-42308142 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0021680
 protein coding gene Chr17:43381972-43388361 (-)
CAST/EiJ ENSTCUG00005022364
 protein coding gene Chr17:43461770-43470167 (-)
CBA/J ENSMUSG00210030806
 protein coding gene Chr17:42495613-42502514 (-)
DBA/2J ENSMUSG00185028626
 protein coding gene Chr17:45401009-45407910 (-)
FVB/NJ ENSMUSG00205051392
 protein coding gene Chr17:42971712-42978621 (-)
JF1/MsJ ENSUMUG00000027534
 protein coding gene Chr17:45018066-45026471 (-)
LP/J ENSMUSG00230041161
 protein coding gene Chr17:46291988-46300302 (-)
NOD/ShiLtJ ENSMUSG00190015368
 protein coding gene Chr17:42381699-42390098 (-)
NZO/HlLtJ ENSMUSG00225042970
 protein coding gene Chr17:48548275-48555179 (-)
PWK/PhJ ENSLUMG00010029203
 protein coding gene Chr17:42254060-42262460 (-)
SPRET/EiJ ENSMSPG00010032464
 protein coding gene Chr17:42459744-42466979 (-)
WSB/EiJ ENSIUOG00005025399
 protein coding gene Chr17:43344545-43351573 (-)



Homology
more
  • Human Ortholog
    RRP36, ribosomal RNA processing 36
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    RRP36, ribosomal RNA processing 36
  • Synonyms
    C6orf153, dJ20C7.4
  • Links
    NCBI Gene ID: 88745
    UniProt: Q96EU6

  • Chr Location
    6p21.1; chr6:43021593-43034156 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotypes from 1 allele in 1 genetic background
    6 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    11
  • GO References
    4
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • cDNA Data
    24
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 224823 NCBI Gene Model | MGI Sequence Detail 8004 C57BL/6J ±  kb
    transcript NM_001368622 RefSeq | MGI Sequence Detail 2565 C57BL/6  
    polypeptide Q3UFY0 UniProt | EBI | MGI Sequence Detail 244 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 24
      cDNA 24

      Microarray probesets 3
    References
    more
    • Summaries
      All 28
      Gene Ontology 4
      Phenotypes 6
    • Earliest
      J:82808 Strausberg RL, et al., Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903
    • Latest
      J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    09/15/2026
    MGI 6.29     		The Jackson Laboratory