BC023105 Pseudogene Detail

Summary

• Symbol
  BC023105
• Name
  cDNA sequence BC023105
• Synonyms
  MGC:28198

• Feature Type
  pseudogene
• IDs
  MGI:2384767
  NCBI Gene: 667597
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr18:60574837-60576052 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, 34.36 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  142 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_2384767	pseudogene	Chr18:60572466-60576925 (+)
129S1/SvImJ	ENSMUSG00200034146	pseudogene	Chr18:57742307-57743522 (+)
A/J	ENSMUSG00195005443	pseudogene	Chr18:57802515-57803730 (+)
AKR/J	ENSMUSG00220016759	pseudogene	Chr18:57791647-57792861 (+)
BALB/cJ	ENSMUSG00180012916	pseudogene	Chr18:58374136-58375351 (+)
C3H/HeJ	ENSMUSG00175036515	pseudogene	Chr18:57987236-57988451 (+)
C57BL/6NJ	ENSMUSG00215040049	pseudogene	Chr18:57307070-57308285 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0034023	pseudogene	Chr18:57013721-57014947 (+)
CAST/EiJ	ENSTCUG00005027493	pseudogene	Chr18:57010904-57012118 (+)
CBA/J	ENSMUSG00210032950	pseudogene	Chr18:57936887-57938102 (+)
DBA/2J	ENSMUSG00185015599	pseudogene	Chr18:57834484-57835699 (+)
FVB/NJ	ENSMUSG00205018095	pseudogene	Chr18:57324124-57325338 (+)
JF1/MsJ	ENSUMUG00000036713	pseudogene	Chr18:57704670-57705885 (+)
LP/J	ENSMUSG00230011925	pseudogene	Chr18:59901974-59903189 (+)
NOD/ShiLtJ	ENSMUSG00190034442	pseudogene	Chr18:57593332-57594546 (+)
NZO/HlLtJ	ENSMUSG00225035552	pseudogene	Chr18:59777153-59778368 (+)
PWK/PhJ	ENSLUMG00010008572	pseudogene	Chr18:58121929-58123143 (+)
SPRET/EiJ	ENSMSPG00010019044	pseudogene	Chr18:58341388-58342602 (+)
WSB/EiJ	ENSIUOG00005009795	pseudogene	Chr18:57466753-57467968 (+)

Homology

• Gene Tree
  BC023105
  

Expression

• Assay Results
  597
• cDNA Data
  2

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  27
• RefSeq
  2
• UniProt
  1

• Ensembl
  ENSMUSG00000063388 (Evidence)
• NCBI Gene
  667597

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000063388	Ensembl Gene Model | MGI Sequence Detail	1216	C57BL/6J
transcript	ENSMUST00000073997	Ensembl | MGI Sequence Detail	1216	Not Applicable
polypeptide	Q8R5A7	UniProt | EBI | MGI Sequence Detail	410	Not Applicable

Protein
Information

• UniProt
  1 Sequence
• InterPro Domains
  IPR051515 Immunity-related GTPase
  IPR007743 Immunity-related GTPases-like
  IPR030385 IRG-type guanine nucleotide-binding (G) domain
  IPR027417 P-loop containing nucleoside triphosphate hydrolase

Molecular
Reagents

• All nucleic 2

  cDNA 2

  
  

  Microarray probesets 2

References

• Summaries
  All 12
• Earliest
  J:53168 Bairoch A, et al., SWISS-PROT Annotated protein sequence database. Database Release. 1999;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;