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Pramel6 Gene Detail
Summary
  • Symbol
    Pramel6
  • Name
    PRAME like 6
  • Feature Type
    protein coding gene
  • IDs
    MGI:2156390
    NCBI Gene: 347711
  • Alliance
    genome feature page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:87336909-87341209 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 49.86 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    177 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2156390
 protein coding gene Chr2:87336909-87341216 (+)
129S1/SvImJ ENSMUSG00200052811
 protein coding gene Chr2:84358885-84362332 (+)
A/J ENSMUSG00195052900
 protein coding gene Chr2:84474731-84478181 (+)
AKR/J ENSMUSG00220052028
 protein coding gene Chr2:84380197-84383647 (+)
BALB/cJ ENSMUSG00180054470
 protein coding gene Chr2:84402475-84405925 (+)
C3H/HeJ ENSMUSG00175051535
 protein coding gene Chr2:84517268-84520718 (+)
C57BL/6NJ ENSMUSG00215052005
 protein coding gene Chr2:84444005-84447452 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0023828
 protein coding gene Chr2:81715108-81719517 (+)
CAST/EiJ ENSTCUG00005051344
 protein coding gene Chr2:83864173-83867620 (+)
CBA/J ENSMUSG00210035484
 protein coding gene Chr2:84545169-84548619 (+)
DBA/2J ENSMUSG00185056755
 protein coding gene Chr2:84398614-84402064 (+)
FVB/NJ ENSMUSG00205042345
 protein coding gene Chr2:83734801-83738251 (+)
JF1/MsJ ENSUMUG00000006078
 protein coding gene Chr2:84251191-84254647 (+)
LP/J ENSMUSG00230037394
 protein coding gene Chr2:86149538-86152988 (+)
NOD/ShiLtJ ENSMUSG00190034112
 protein coding gene Chr2:84464214-84467664 (+)
NZO/HlLtJ ENSMUSG00225051684
 protein coding gene Chr2:94059225-94062675 (+)
PWK/PhJ ENSLUMG00010047899
 protein coding gene Chr2:84323777-84327227 (+)
SPRET/EiJ ENSMSPG00010051783
 protein coding gene Chr2:86313486-86315907 (+)
WSB/EiJ ENSIUOG00005053368
 protein coding gene Chr2:84318869-84322319 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    12 phenotype references
  • All Mutations and Alleles
    9
  • Chemically induced (other)
    1
  • Endonuclease-mediated
    2
  • Gene trapped
    1
  • Targeted
    5
  • Genomic Mutations
    3 involving Pramel6
  • Incidental Mutations
    APF , CvDC
  • Find Mice (IMSR)
    30 strains or lines available
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    4
  • GO References
    1
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    603
  • Tissues
    4
  • cDNA Data
    17
  • Literature Summary
    4
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 347711 NCBI Gene Model | MGI Sequence Detail 4301 C57BL/6J ±  kb
transcript NM_001356544 RefSeq | MGI Sequence Detail 1870 C57BL/6  
polypeptide NP_001343474 RefSeq | MGI Sequence Detail 485 C57BL/6  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 20
    Genomic 2
    cDNA 17
    Primer pair 1

    Microarray probesets 4
Other
Accession IDs
less
MGI:2139505, MGI:2139506
References
more
  • Summaries
    All 36
    Developmental Gene Expression 4
    Gene Ontology 1
    Phenotypes 12
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:326541 Cyagen Biosciences Inc., Cyagen Biosciences Website. 2022;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/15/2026
MGI 6.29 		The Jackson Laboratory