Atp5l-ps1 Pseudogene Detail

Summary

• Symbol
  Atp5l-ps1
• Name
  ATP synthase, H+ transporting, mitochondrial F0 complex, subunit G, pseudogene 1

• Feature Type
  pseudogene
• IDs
  MGI:2153586
  NCBI Gene: 140551
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr7:62126054-62126365 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 34.38 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  133 from dbSNP Build 142
• Strain Annotations
  20

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_2153586	pseudogene	Chr7:62125992-62126462 (+)
129S1/SvImJ	ENSMUSG00200008911	pseudogene	Chr7:48859065-48859376 (+)
A/J	ENSMUSG00195013336	pseudogene	Chr7:53279405-53279716 (+)
AKR/J	ENSMUSG00220011593	pseudogene	Chr7:46787920-46788231 (+)
BALB/cJ	ENSMUSG00180010920	pseudogene	Chr7:49997075-49997386 (+)
C3H/HeJ	ENSMUSG00175046518	pseudogene	Chr2:163215042-163215353 (+)
C3H/HeJ	ENSMUSG00175010885	pseudogene	Chr7:50741710-50742021 (+)
C57BL/6NJ	ENSMUSG00215002024	pseudogene	Chr7:49909413-49909724 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012573	pseudogene	ChrX:31836691-31836963 (+)
CAST/EiJ	ENSTCUG00005012163	pseudogene	Chr7:53528882-53529193 (+)
CBA/J	ENSMUSG00210019922	pseudogene	Chr7:50643286-50643597 (+)
DBA/2J	ENSMUSG00185006315	pseudogene	Chr7:55027699-55028010 (+)
DBA/2J	ENSMUSG00185027626	pseudogene	Chr2:162882209-162882520 (+)
FVB/NJ	ENSMUSG00205005283	pseudogene	Chr7:50572760-50573071 (+)
JF1/MsJ	ENSUMUG00000014292	pseudogene	Chr7:59762630-59762941 (+)
LP/J	ENSMUSG00230021256	pseudogene	Chr7:60994474-60994785 (+)
NOD/ShiLtJ	ENSMUSG00190007411	pseudogene	Chr7:50752039-50752350 (+)
NZO/HlLtJ	ENSMUSG00225010676	pseudogene	Chr7:59289866-59290177 (+)
PWK/PhJ	ENSLUMG00010002357	pseudogene	Chr7:49306022-49306333 (+)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005004748	pseudogene	Chr7:51159164-51159475 (+)

Homology

• Gene Tree
  Atp5l-ps1
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  9 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Atp5l-ps1
• Find Mice (IMSR)
  1 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  25
• RefSeq
  1

• Ensembl
  ENSMUSG00000072460 (Evidence)
• NCBI Gene
  140551

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000072460	Ensembl Gene Model | MGI Sequence Detail	312	C57BL/6J
transcript	ENSMUST00000097132	Ensembl | MGI Sequence Detail	312	Not Applicable

Molecular
Reagents

• All nucleic 1

  Genomic 1

References

• Summaries
  All 14

  Phenotypes 9
• Earliest
  J:88307 Giometti CS, et al., The analysis of recessive lethal mutations in mice by using two-dimensional gel electrophoresis of liver proteins. Mutat Res. 1990 Sep;242(1):47-55
• Latest
  J:123187 Cohen-Barak O, et al., Stem cell transplantation demonstrates that Sox6 represses epsilon y globin expression in definitive erythropoiesis of adult mice. Exp Hematol. 2007 Mar;35(3):358-67