Nasp-ps1 Pseudogene Detail

Summary

• Symbol
  Nasp-ps1
• Name
  nuclear autoantigenic sperm protein (histone-binding), pseudogene 1
• Synonyms
  Gm8455

• Feature Type
  pseudogene
• IDs
  MGI:2153023
  NCBI Gene: 667099
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr6:63137259-63137949 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, 29.77 cM, cytoband C1
• Mapping Data
  2 experiments

Strain
Comparison

• SNPs within 2kb
  116 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_2153023	pseudogene	Chr6:63137258-63138060 (+)
129S1/SvImJ	ENSMUSG00200006569	pseudogene	Chr6:60075972-60076662 (+)
A/J	ENSMUSG00195035111	pseudogene	Chr6:59790862-59791552 (+)
AKR/J	ENSMUSG00220006194	pseudogene	Chr6:59271673-59272363 (+)
BALB/cJ	ENSMUSG00180010266	pseudogene	Chr6:60146962-60147652 (+)
C3H/HeJ	ENSMUSG00175048835	pseudogene	Chr6:117292306-117292996 (-)
C57BL/6NJ	ENSMUSG00215028265	pseudogene	Chr6:60126569-60127259 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011911	pseudogene	Chr6:57635725-57636413 (+)
CAST/EiJ	ENSTCUG00005040281	pseudogene	Chr6:60448023-60448713 (+)
CBA/J	ENSMUSG00210033912	pseudogene	Chr6:59946126-59946816 (+)
DBA/2J	ENSMUSG00185020003	pseudogene	Chr6:60527722-60528412 (+)
FVB/NJ	ENSMUSG00205033120	pseudogene	Chr6:59933025-59933707 (+)
JF1/MsJ	ENSUMUG00000037271	pseudogene	Chr6:59806699-59807389 (+)
LP/J	ENSMUSG00230025592	pseudogene	Chr6:61629976-61630666 (+)
NOD/ShiLtJ	ENSMUSG00190008810	pseudogene	Chr6:59814380-59815070 (+)
NZO/HlLtJ	ENSMUSG00225021798	pseudogene	Chr6:63621336-63622026 (+)
PWK/PhJ	ENSLUMG00010018808	pseudogene	Chr6:59042446-59043136 (+)
SPRET/EiJ	ENSMSPG00010026194	pseudogene	Chr6:60763426-60764109 (+)
WSB/EiJ	ENSIUOG00005020498	pseudogene	Chr6:60615916-60616606 (+)

Homology

• Gene Tree
  Nasp-ps1
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  1

• Ensembl
  ENSMUSG00000107484 (Evidence)
• NCBI Gene
  667099

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000107484	Ensembl Gene Model | MGI Sequence Detail	691	C57BL/6J
transcript	ENSMUST00000205050	Ensembl | MGI Sequence Detail	691	Not Applicable

Molecular
Reagents

• All nucleic 1

  Genomic 1

Other
Accession IDs

MGI:3644805

References

• Summaries
  All 6
• Earliest
  J:71917 Richardson RT, et al., Comparison of mouse and human NASP genes and expression in human transformed and tumor cell lines. Gene. 2001 Aug 22;274(1-2):67-75