Cts8-ps Pseudogene Detail

Summary

• Symbol
  Cts8-ps
• Name
  cathepsin 8, pseudogene
• Synonyms
  Cts2-ps

• Feature Type
  pseudogene
  BioType Conflict
  
• IDs
  MGI:2151708
  NCBI Gene: 116911
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:61429194-61436664 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, 32.69 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  257 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_2151708	pseudogene	Chr13:61429194-61436664 (-)
129S1/SvImJ	ENSMUSG00200017433	pseudogene	Chr13:58373726-58381198 (-)
A/J	ENSMUSG00195045065	pseudogene	Chr13:57842758-57850218 (-)
AKR/J	ENSMUSG00220043021	pseudogene	Chr13:57353372-57360842 (-)
BALB/cJ	ENSMUSG00180017070	pseudogene	Chr13:58045281-58052751 (-)
C3H/HeJ	ENSMUSG00175042923	pseudogene	Chr13:57831494-57838964 (-)
C57BL/6NJ	ENSMUSG00215040506	pseudogene	Chr13:57839211-57846681 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005042239	pseudogene	Chr13:58207191-58214678 (-)
CBA/J	ENSMUSG00210040605	pseudogene	Chr13:58036349-58043819 (-)
DBA/2J	ENSMUSG00185017637	pseudogene	Chr13:58884987-58892457 (-)
FVB/NJ	ENSMUSG00205042939	pseudogene	Chr13:57618735-57626207 (-)
JF1/MsJ	ENSUMUG00000035166	pseudogene	Chr13:58233991-58241458 (-)
LP/J	ENSMUSG00230036506	pseudogene	Chr13:68244705-68252168 (-)
NOD/ShiLtJ	ENSMUSG00190038294	pseudogene	Chr13:57891647-57899119 (-)
NZO/HlLtJ	ENSMUSG00225047810	pseudogene	Chr13:61935455-61942925 (-)
PWK/PhJ	ENSLUMG00010023450	pseudogene	Chr13:57158960-57166427 (-)
SPRET/EiJ	ENSMSPG00010044244	pseudogene	Chr13:57603581-57611066 (-)
WSB/EiJ	ENSIUOG00005025818	pseudogene	Chr13:57379340-57386803 (-)

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Cts8-ps
• Find Mice (IMSR)
  0 strains or lines available

Expression

• cDNA Data
  1

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  27
• RefSeq
  1

• Ensembl
  ENSMUSG00000114867 (Evidence), ENSMUSG00000121401 (Evidence)
• NCBI Gene
  116911

Representative Sequences			Length	Strain/Species
genomic	116911	NCBI Gene Model | MGI Sequence Detail	7471	C57BL/6J
transcript	NR_027871	RefSeq | MGI Sequence Detail	4221	C57BL/6

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 9

  Phenotypes 3
• Earliest
  J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
• Latest
  J:74618 Deussing J, et al., Identification and characterization of a dense cluster of placenta-specific cysteine peptidase genes and related genes on mouse chromosome 13. Genomics. 2002 Feb;79(2):225-40