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Wdr87-ps Pseudogene Detail
Summary
  • Symbol
    Wdr87-ps
  • Name
    WD repeat domain 87, pseudogene
  • Synonyms
    4932431P20Rik
Location &
Maps
more
  • Sequence Map
    Chr7:29223968-29237289 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
  • Genetic Map
    Chromosome 7, 17.07 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    336 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2149781
pseudogene Chr7:29218688-29237289 (+)
129S1/SvImJ MGP_129S1SvImJ_G0031984
protein coding gene Chr7:28449320-28467703 (+)
A/J MGP_AJ_G0031962
protein coding gene Chr7:27695338-27715011 (+)
AKR/J MGP_AKRJ_G0031895
protein coding gene Chr7:28425545-28446213 (+)
BALB/cJ MGP_BALBcJ_G0031969
protein coding gene Chr7:27892561-27911311 (+)
C3H/HeJ MGP_C3HHeJ_G0031688
protein coding gene Chr7:28823772-28851956 (+)
C57BL/6NJ MGP_C57BL6NJ_G0032434
protein coding gene Chr7:29357048-29380842 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0029484
protein coding gene Chr7:28746204-28764645 (+)
CAST/EiJ MGP_CASTEiJ_G0031022
protein coding gene Chr7:22093879-22115083 (+)
CBA/J MGP_CBAJ_G0031654
protein coding gene Chr7:30736668-30758056 (+)
DBA/2J MGP_DBA2J_G0031806
protein coding gene Chr7:27433962-27452372 (+)
FVB/NJ MGP_FVBNJ_G0031763
protein coding gene Chr7:27556861-27575667 (+)
LP/J MGP_LPJ_G0031886
protein coding gene Chr7:28754152-28775629 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0031798
protein coding gene Chr7:30081544-30102870 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0032463
protein coding gene Chr7:27908831-27929334 (+)
PWK/PhJ MGP_PWKPhJ_G0030748
protein coding gene Chr7:22495640-22515160 (+)
SPRET/EiJ MGP_SPRETEiJ_G0030581
protein coding gene Chr7:18924575-18942908 (+)
WSB/EiJ MGP_WSBEiJ_G0031132
protein coding gene Chr7:28307614-28308953 (+)



Homology
more
  • Human Ortholog
    WDR87, WD repeat domain 87
  • Vertebrate Orthologs
    1
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    WDR87, WD repeat domain 87
  • Synonyms
    NYD-SP11
  • Links
    NCBI Gene ID: 83889
    neXtProt AC: NX_Q6ZQQ6
    UniProt: Q6ZQQ6

  • Chr Location
    19q13.13; chr19:37884823-37906697 (-)  GRCh38

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000074224 Ensembl Gene Model | MGI Sequence Detail 13322 C57BL/6J ±  kb
transcript ENSMUST00000141713 Ensembl | MGI Sequence Detail 9288 Not Applicable  
polypeptide Q3V0H8 UniProt | EBI | MGI Sequence Detail 335 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 4
    Genomic 2
    cDNA 2

    Microarray probesets 4
Other
Accession IDs
less
MGI:6723881
References
more
  • Summaries
    All 21
    Phenotypes 3
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
11/19/2024
MGI 6.24
The Jackson Laboratory