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4930540M05Rik Gene Detail
Summary
  • Symbol
    4930540M05Rik
  • Name
    RIKEN cDNA 4930540M05 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:2148236
    NCBI Gene: 112414
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr6:119873120-119879614 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 56.86 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    27 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2148236
 lncRNA gene Chr6:119873120-119879614 (-)
129S1/SvImJ MGP_129S1SvImJ_G0007057
 lincRNA gene Chr6:122735552-122742026 (-)
A/J MGP_AJ_G0007053
 lincRNA gene Chr6:118030680-118037159 (-)
AKR/J MGP_AKRJ_G0007022
 lincRNA gene Chr6:121203843-121210057 (-)
BALB/cJ MGP_BALBcJ_G0007028
 lincRNA gene Chr6:117797442-117803909 (-)
C3H/HeJ MGP_C3HHeJ_G0006895
 lincRNA gene Chr6:63104320-63110797 (+)
C57BL/6NJ MGP_C57BL6NJ_G0007194
 lincRNA gene Chr6:125870419-125877405 (-)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0006884
 lincRNA gene Chr6:121645974-121652468 (-)
CBA/J MGP_CBAJ_G0006953
 lincRNA gene Chr6:130865308-130871775 (-)
DBA/2J MGP_DBA2J_G0006975
 lincRNA gene Chr6:116927503-116934010 (-)
FVB/NJ MGP_FVBNJ_G0006999
 lincRNA gene Chr6:116043560-116050771 (-)
LP/J MGP_LPJ_G0007060
 lincRNA gene Chr6:122740273-122746780 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0006979
 lincRNA gene Chr6:134846309-134852794 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0007199
 lincRNA gene Chr6:121234978-121243065 (-)
PWK/PhJ MGP_PWKPhJ_G0006824
 lincRNA gene Chr6:115950713-115957435 (-)
SPRET/EiJ MGP_SPRETEiJ_G0006734
 lincRNA gene Chr6:119967251-119973677 (-)
WSB/EiJ MGP_WSBEiJ_G0006942
 lincRNA gene Chr6:121516659-121523135 (-)



Homology
less
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    1
Sequences &
Gene Models
less
  • All Sequences
    20
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000097831 Ensembl Gene Model | MGI Sequence Detail 6495 C57BL/6J ±  kb
transcript ENSMUST00000180527 Ensembl | MGI Sequence Detail 2068 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 1
References
more
  • Summaries
    All 7
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/09/2024
MGI 6.23 		The Jackson Laboratory