AI463229 Gene Detail

Summary

• Symbol
  AI463229
• Name
  expressed sequence AI463229
• Synonyms
  100042802

• Feature Type
  lncRNA gene
• IDs
  MGI:2145255
  NCBI Gene: 100042802
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:37840989-37851711 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, 17.61 cM
• Mapping Data
  2 experiments

Strain
Comparison

• SNPs within 2kb
  405 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_2145255	lncRNA gene	Chr13:37744648-37852074 (-)
129S1/SvImJ	ENSMUSG00200013680	lncRNA gene	Chr13:35066227-35076972 (-)
A/J	ENSMUSG00195033933	lncRNA gene	Chr13:34143365-34154094 (-)
AKR/J	ENSMUSG00220035935	lncRNA gene	Chr13:33912942-33923655 (-)
BALB/cJ	ENSMUSG00180008325	lncRNA gene	Chr13:34448963-34459690 (-)
C3H/HeJ	ENSMUSG00175015011	lncRNA gene	Chr13:34401629-34412355 (-)
C57BL/6NJ	ENSMUSG00215015182	lncRNA gene	Chr13:34570785-34581499 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005035464	lncRNA gene	Chr13:34501351-34512092 (-)
CBA/J	ENSMUSG00210012009	lncRNA gene	Chr13:34409357-34420084 (-)
DBA/2J	ENSMUSG00185033362	lncRNA gene	Chr13:35236006-35246694 (-)
FVB/NJ	ENSMUSG00205038596	lncRNA gene	Chr13:34104487-34115232 (-)
JF1/MsJ	ENSUMUG00000034125	lncRNA gene	Chr13:34795425-34806278 (-)
LP/J	ENSMUSG00230016246	lncRNA gene	Chr13:44552290-44563015 (-)
NOD/ShiLtJ	ENSMUSG00190013559	lncRNA gene	Chr13:34632051-34642766 (-)
NZO/HlLtJ	ENSMUSG00225034808	lncRNA gene	Chr13:38345598-38356315 (-)
PWK/PhJ	ENSLUMG00010030729	lncRNA gene	Chr13:33625104-33636113 (-)
SPRET/EiJ	ENSMSPG00010011692	lncRNA gene	Chr13:33639107-33649747 (-)
WSB/EiJ	ENSIUOG00005029463	lncRNA gene	Chr13:33770450-33781119 (-)

Homology

• Gene Tree
  AI463229
  

Expression

• Assay Results
  597
• cDNA Data
  2

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  127
• RefSeq
  3

• Ensembl
  ENSMUSG00000114828 (Evidence)
• NCBI Gene
  100042802

Representative Sequences			Length	Strain/Species
genomic	100042802	NCBI Gene Model | MGI Sequence Detail	10723	C57BL/6J
transcript	AK078975	GenBank | ENA | DDBJ | MGI Sequence Detail	1240	C57BL/6J

Molecular
Reagents

• All nucleic 2

  cDNA 2

  
  

  Microarray probesets 1

Other
Accession IDs

MGI:3782214

References

• Summaries
  All 7
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:157972 Mouse Genome Informatics Scientific Curators, Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2). Database Download. 2010;