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A430027C01Rik Gene Detail
Summary
  • Symbol
    A430027C01Rik
  • Name
    RIKEN cDNA A430027C01 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:2143417
    NCBI Gene: 97545
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr9:71918658-71920301 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 9, Syntenic
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    27 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2143417
 lncRNA gene Chr9:71918658-71920301 (-)
129S1/SvImJ MGP_129S1SvImJ_G0002301
 unclassified gene Chr9:72147038-72148684 (-)
A/J MGP_AJ_G0002278
 unclassified gene Chr9:69625764-69627414 (-)
AKR/J MGP_AKRJ_G0002264
 unclassified gene Chr9:71296249-71297892 (-)
BALB/cJ MGP_BALBcJ_G0002272
 unclassified gene Chr9:69339451-69341101 (-)
C3H/HeJ MGP_C3HHeJ_G0002249
 unclassified gene Chr9:71799037-71800687 (-)
C57BL/6NJ MGP_C57BL6NJ_G0002398
 unclassified gene Chr9:74051336-74052979 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0002010
 unclassified gene Chr9:69142037-69143599 (-)
CAST/EiJ MGP_CASTEiJ_G0002214
 unclassified gene Chr9:72097305-72098861 (-)
CBA/J MGP_CBAJ_G0002243
 unclassified gene Chr9:76616861-76618511 (-)
DBA/2J MGP_DBA2J_G0002246
 unclassified gene Chr9:69353279-69354929 (-)
FVB/NJ MGP_FVBNJ_G0002255
 unclassified gene Chr9:68672779-68674429 (-)
LP/J MGP_LPJ_G0002300
 unclassified gene Chr9:72356355-72358001 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0002230
 unclassified gene Chr9:77668372-77671554 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0002386
 unclassified gene Chr9:71428858-71430508 (-)
PWK/PhJ MGP_PWKPhJ_G0002174
 unclassified gene Chr9:69607953-69609509 (-)
SPRET/EiJ MGP_SPRETEiJ_G0002136
 unclassified gene Chr9:71741221-71742779 (-)
WSB/EiJ MGP_WSBEiJ_G0002241
 unclassified gene Chr9:71360554-71362200 (-)



Homology
less
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    2
Sequences &
Gene Models
less
  • All Sequences
    21
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000104432 Ensembl Gene Model | MGI Sequence Detail 1644 C57BL/6J ±  kb
transcript AK039904 GenBank | ENA | DDBJ | MGI Sequence Detail 1644 C57BL/6J  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2
References
more
  • Summaries
    All 8
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/09/2024
MGI 6.23 		The Jackson Laboratory