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AI429214 Gene Detail
Summary
  • Symbol
    AI429214
  • Name
    expressed sequence AI429214
  • Feature Type
    protein coding gene
  • IDs
    MGI:2142538
    NCBI Gene: 621080
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr8:37460758-37462687 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 8, 23.15 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    80 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2142538
 protein coding gene Chr8:37460729-37462687 (+)
129S1/SvImJ MGP_129S1SvImJ_G0033546
 protein coding gene Chr8:35684958-35686884 (+)
A/J MGP_AJ_G0033526
 protein coding gene Chr8:34289080-34291006 (+)
AKR/J MGP_AKRJ_G0033450
 protein coding gene Chr8:35333662-35335588 (+)
BALB/cJ MGP_BALBcJ_G0033522
 protein coding gene Chr8:34387035-34388961 (+)
C3H/HeJ MGP_C3HHeJ_G0033234
 protein coding gene Chr8:35711299-35713225 (+)
C57BL/6NJ MGP_C57BL6NJ_G0034038
 protein coding gene Chr8:36999096-37006000 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0030987
 protein coding gene Chr8:31208950-31210856 (+)
CAST/EiJ MGP_CASTEiJ_G0032561
 protein coding gene Chr8:35165595-35167510 (+)
CBA/J MGP_CBAJ_G0033212
 protein coding gene Chr8:38455778-38457704 (+)
DBA/2J MGP_DBA2J_G0033365
 protein coding gene Chr8:34200449-34202375 (+)
FVB/NJ MGP_FVBNJ_G0033310
 protein coding gene Chr8:33853158-33855084 (+)
LP/J MGP_LPJ_G0033455
 protein coding gene Chr8:35649638-35651564 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0033352
 protein coding gene Chr8:37847928-37849854 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0034057
 protein coding gene Chr8:35493456-35495382 (+)
PWK/PhJ MGP_PWKPhJ_G0032271
 protein coding gene Chr8:33764251-33766553 (+)
SPRET/EiJ MGP_SPRETEiJ_G0032103
 protein coding gene Chr8:34728792-34730709 (+)
WSB/EiJ MGP_WSBEiJ_G0032677
 protein coding gene Chr8:35686189-35688115 (+)



Homology
more
  • Human Ortholog
    C8orf48, chromosome 8 open reading frame 48
  • Vertebrate Orthologs
    1
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    C8orf48, chromosome 8 open reading frame 48
  • Links
    NCBI Gene ID: 157773
    neXtProt AC: NX_Q96LL4
    UniProt: Q96LL4

  • Chr Location
    8p22; chr8:13566869-13568288 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    9
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000074384 Ensembl Gene Model | MGI Sequence Detail 1930 C57BL/6J ±  kb
transcript ENSMUST00000098825 Ensembl | MGI Sequence Detail 1930 Not Applicable  
polypeptide ENSMUSP00000096424 Ensembl | MGI Sequence Detail 293 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 9
    cDNA 9

    Microarray probesets 3
References
more
  • Summaries
    All 18
  • Earliest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory