AU020206 Gene Detail

Summary

• Symbol
  AU020206
• Name
  expressed sequence AU020206

• Feature Type
  lncRNA gene
• IDs
  MGI:2142134
  NCBI Gene: 108167440
• Alliance
  genome feature page
• Transcription Start Sites
  15 TSS

Location &
Maps

• Sequence Map
  Chr7:75418786-75431868 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 43.76 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  462 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_2142134	lncRNA gene	Chr7:75398815-75440938 (-)
129S1/SvImJ	ENSMUSG00200035505	lncRNA gene	Chr7:62188322-62201386 (-)
A/J	ENSMUSG00195015059	lncRNA gene	Chr7:66615084-66628171 (-)
AKR/J	ENSMUSG00220020541	lncRNA gene	Chr7:60160849-60173931 (-)
BALB/cJ	ENSMUSG00180013321	lncRNA gene	Chr7:63320578-63333663 (-)
C3H/HeJ	ENSMUSG00175022085	lncRNA gene	Chr7:64089747-64102812 (-)
C57BL/6NJ	ENSMUSG00215033437	lncRNA gene	Chr7:63233216-63246300 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0006571	lincRNA gene	Chr7:78499228-78512048 (-)
CAST/EiJ	ENSTCUG00005004589	lncRNA gene	Chr7:66727195-66740486 (-)
CBA/J	ENSMUSG00210023968	lncRNA gene	Chr7:63948114-63961179 (-)
DBA/2J	ENSMUSG00185001377	lncRNA gene	Chr7:68271032-68284098 (-)
FVB/NJ	ENSMUSG00205025590	lncRNA gene	Chr7:63904581-63917663 (-)
JF1/MsJ	ENSUMUG00000034279	lncRNA gene	Chr7:73006256-73019404 (-)
LP/J	ENSMUSG00230015388	lncRNA gene	Chr7:74354005-74367091 (-)
NOD/ShiLtJ	ENSMUSG00190019275	lncRNA gene	Chr7:64086441-64099524 (-)
NZO/HlLtJ	ENSMUSG00225042828	lncRNA gene	Chr7:72615506-72628592 (-)
PWK/PhJ	ENSLUMG00010017953	lncRNA gene	Chr7:62561368-62574477 (-)
SPRET/EiJ	ENSMSPG00010027305	lncRNA gene	Chr7:62974138-62987172 (-)
WSB/EiJ	ENSIUOG00005022523	lncRNA gene	Chr7:64472241-64485338 (-)

Homology

• Gene Tree
  AU020206
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  16 phenotype references
  

• All Mutations and Alleles
  65
• Chemically induced (other)
  1
• Gene trapped
  62
• Radiation induced
  2
• Genomic Mutations
  3 involving AU020206
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  8

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  43
• RefSeq
  1

• Ensembl
  ENSMUSG00000097415 (Evidence)
• NCBI Gene
  108167440

Representative Sequences			Length	Strain/Species
genomic	108167440	NCBI Gene Model | MGI Sequence Detail	13083	C57BL/6J
transcript	NR_165329	RefSeq | MGI Sequence Detail	1401	C57BL/6

Molecular
Reagents

• All nucleic 8

  cDNA 8

  
  

  Microarray probesets 2

References

• Summaries
  All 30

  Phenotypes 16
• Earliest
  J:88307 Giometti CS, et al., The analysis of recessive lethal mutations in mice by using two-dimensional gel electrophoresis of liver proteins. Mutat Res. 1990 Sep;242(1):47-55
• Latest
  J:358534 Zhang N, et al., Exosomal long non-coding RNA AU020206 alleviates macrophage pyroptosis in atherosclerosis by suppressing CEBPB-mediated NLRP3 transcription. Exp Cell Res. 2024 May 15;438(2):114054

TSS for AU020206:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr73066	Chr7:75431828-75431874 (-)	17 bp
Tssr73065	Chr7:75430519-75430542 (-)	1,337 bp
Tssr73064	Chr7:75430507-75430518 (-)	1,355 bp
Tssr73063	Chr7:75430493-75430505 (-)	1,369 bp
Tssr73062	Chr7:75430292-75430303 (-)	1,570 bp
Tssr73061	Chr7:75430254-75430276 (-)	1,603 bp
Tssr73060	Chr7:75430167-75430179 (-)	1,695 bp
Tssr73059	Chr7:75430075-75430157 (-)	1,752 bp
Tssr73058	Chr7:75430011-75430052 (-)	1,836 bp
Tssr73057	Chr7:75426534-75426540 (-)	5,331 bp
Tssr73056	Chr7:75426354-75426373 (-)	5,504 bp
Tssr73055	Chr7:75423881-75423905 (-)	7,975 bp
Tssr73054	Chr7:75423859-75423870 (-)	8,003 bp
Tssr73053	Chr7:75423814-75423821 (-)	8,050 bp
Tssr73052	Chr7:75422639-75422677 (-)	9,210 bp