About   Help   FAQ
Prrt4 Gene Detail
Summary
  • Symbol
    Prrt4
  • Name
    proline-rich transmembrane protein 4
  • Synonyms
    D330027H18Rik
Location &
Maps
more
  • Sequence Map
    Chr6:29169231-29179583 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 12.35 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    296 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2141677
 protein coding gene Chr6:29169229-29179583 (-)
129S1/SvImJ ENSMUSG00200032655
 protein coding gene Chr6:26223493-26233812 (-)
A/J ENSMUSG00195007618
 protein coding gene Chr6:26185959-26196285 (-)
AKR/J ENSMUSG00220003333
 protein coding gene Chr6:25778945-25789266 (-)
BALB/cJ ENSMUSG00180019747
 protein coding gene Chr6:26317652-26327973 (-)
C3H/HeJ ENSMUSG00175017381
 protein coding gene Chr6:26180894-26191217 (-)
C57BL/6NJ ENSMUSG00215022556
 protein coding gene Chr6:26207947-26218297 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0028163
 protein coding gene Chr6:24010057-24019790 (-)
CAST/EiJ ENSTCUG00005024475
 protein coding gene Chr6:25756715-25767112 (-)
CBA/J ENSMUSG00210003379
 protein coding gene Chr6:26202222-26212543 (-)
DBA/2J ENSMUSG00185020743
 protein coding gene Chr6:26296688-26307009 (-)
FVB/NJ ENSMUSG00205023814
 protein coding gene Chr6:26275806-26286130 (-)
JF1/MsJ ENSUMUG00000017091
 protein coding gene Chr6:25967364-25977876 (-)
LP/J ENSMUSG00230029702
 protein coding gene Chr6:27240191-27250512 (-)
NOD/ShiLtJ ENSMUSG00190023166
 protein coding gene Chr6:26065843-26076164 (-)
NZO/HlLtJ ENSMUSG00225014120
 protein coding gene Chr6:29201122-29211443 (-)
PWK/PhJ ENSLUMG00010023207
 protein coding gene Chr6:25762091-25772596 (-)
SPRET/EiJ ENSMSPG00010019107
 protein coding gene Chr6:26193576-26203951 (-)
WSB/EiJ ENSIUOG00005032243
 protein coding gene Chr6:26367748-26378056 (-)



Homology
more
  • Human Ortholog
    PRRT4, proline rich transmembrane protein 4
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    PRRT4, proline rich transmembrane protein 4
  • Links
    NCBI Gene ID: 401399
    UniProt: C9JH25

  • Chr Location
    7q32.1; chr7:128350325-128361983 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • cDNA Data
    6
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000079654 Ensembl Gene Model | MGI Sequence Detail 10353 C57BL/6J ±  kb
transcript ENSMUST00000159200 Ensembl | MGI Sequence Detail 3411 Not Applicable  
polypeptide ENSMUSP00000123751 Ensembl | MGI Sequence Detail 902 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 6
    cDNA 6

    Microarray probesets 4
References
more
  • Summaries
    All 26
    Gene Ontology 1
    Phenotypes 6
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
09/15/2026
MGI 6.29 		The Jackson Laboratory