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C78283 Gene Detail
Summary
  • Symbol
    C78283
  • Name
    expressed sequence C78283
  • Feature Type
    lncRNA gene
  • IDs
    MGI:2141303
    NCBI Gene: 97232
  • Alliance
    genome feature page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:74102628-74106682 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    248 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2141303
 lncRNA gene Chr5:74102628-74106682 (+)
129S1/SvImJ ENSMUSG00200036554
 lncRNA gene Chr5:69769288-69772292 (+)
A/J ENSMUSG00195035380
 lncRNA gene Chr5:69094129-69097134 (+)
AKR/J ENSMUSG00220004866
 lncRNA gene Chr5:69199586-69202590 (+)
BALB/cJ ENSMUSG00180025113
 lncRNA gene Chr5:68851141-68854145 (+)
C3H/HeJ ENSMUSG00175028719
 lncRNA gene Chr5:70920530-70923494 (+)
C57BL/6NJ ENSMUSG00215005846
 lncRNA gene Chr5:69679310-69682314 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0006059
 lincRNA gene Chr5:66878278-66880249 (+)
CAST/EiJ ENSTCUG00005033274
 lncRNA gene Chr5:68668415-68671425 (+)
CBA/J ENSMUSG00210023565
 lncRNA gene Chr5:69858608-69861572 (+)
DBA/2J ENSMUSG00185016767
 lncRNA gene Chr5:71688422-71691386 (+)
FVB/NJ ENSMUSG00205031245
 lncRNA gene Chr5:68618042-68621046 (+)
JF1/MsJ ENSUMUG00000006408
 lncRNA gene Chr5:76172813-76175777 (+)
LP/J ENSMUSG00230021669
 lncRNA gene Chr5:76343521-76346525 (+)
NOD/ShiLtJ ENSMUSG00190004275
 lncRNA gene Chr5:68793499-68796503 (+)
NZO/HlLtJ ENSMUSG00225034065
 lncRNA gene Chr5:81414244-81417248 (+)
PWK/PhJ ENSLUMG00010015006
 lncRNA gene Chr5:68732697-68735696 (+)
SPRET/EiJ ENSMSPG00010010057
 lncRNA gene Chr5:70749508-70752524 (+)
WSB/EiJ ENSIUOG00005019256
 lncRNA gene Chr5:71623205-71626195 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    17 phenotype references
  • All Mutations and Alleles
    4
  • Chemically induced (other)
    2
  • Radiation induced
    1
  • Spontaneous
    1
  • Genomic Mutations
    4 involving C78283
  • Find Mice (IMSR)
    0 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • cDNA Data
    3
Sequences &
Gene Models
less
  • All Sequences
    37
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000106968 Ensembl Gene Model | MGI Sequence Detail 4055 C57BL/6J ±  kb
transcript ENSMUST00000245964 Ensembl | MGI Sequence Detail 2893 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3
References
more
  • Summaries
    All 26
    Phenotypes 17
  • Earliest
    J:5021 Batchelor AL, et al., A comparison of the mutagenic effectiveness of chronic neutron- and gamma-irradiation of mouse spermatogonia. Mutat Res. 1966 Jun;3(3):218-29
  • Latest
    J:125425 Howell GR, et al., Mutation of a ubiquitously expressed mouse transmembrane protein (Tapt1) causes specific skeletal homeotic transformations. Genetics. 2007 Feb;175(2):699-707
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory