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AI839979 Gene Detail
Summary
  • Symbol
    AI839979
  • Name
    expressed sequence AI839979
Location &
Maps
more
  • Sequence Map
    Chr5:31726936-31728741 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, 17.27 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    134 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2140975
 lncRNA gene Chr5:31713677-31767890 (-)
129S1/SvImJ ENSMUSG00200014406
 lncRNA gene Chr5:27181483-27196141 (-)
A/J ENSMUSG00195050707
 lncRNA gene Chr5:26661513-26676165 (-)
AKR/J ENSMUSG00220009856
 lncRNA gene Chr5:26676731-26691389 (-)
BALB/cJ ENSMUSG00180037520
 lncRNA gene Chr5:26466062-26480715 (-)
C3H/HeJ ENSMUSG00175049191
 lncRNA gene Chr5:28440353-28455005 (-)
C57BL/6NJ ENSMUSG00215041733
 lncRNA gene Chr5:27177288-27191941 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0006006
 lincRNA gene Chr5:26249323-26251110 (-)
CAST/EiJ ENSTCUG00005025639
 lncRNA gene Chr5:26656406-26671012 (-)
CBA/J ENSMUSG00210049372
 lncRNA gene Chr5:27413505-27428158 (-)
DBA/2J ENSMUSG00185039343
 lncRNA gene Chr5:29268507-29283158 (-)
FVB/NJ ENSMUSG00205043435
 lncRNA gene Chr5:26164987-26179639 (-)
JF1/MsJ ENSUMUG00000053320
 lncRNA gene Chr5:33854798-33869489 (-)
LP/J ENSMUSG00230048271
 lncRNA gene Chr5:33885289-33899946 (-)
NOD/ShiLtJ ENSMUSG00190016540
 lncRNA gene Chr5:26432271-26446923 (-)
NZO/HlLtJ ENSMUSG00225021005
 lncRNA gene Chr5:39093253-39107904 (-)
PWK/PhJ ENSLUMG00010048608
 lncRNA gene Chr5:26562399-26577247 (-)
SPRET/EiJ ENSMSPG00010046039
 lncRNA gene Chr5:27734333-27749081 (-)
WSB/EiJ ENSIUOG00005042721
 lncRNA gene Chr5:29356812-29371463 (-)



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    21 phenotype references
  • All Mutations and Alleles
    5
  • Chemically induced (other)
    2
  • Radiation induced
    2
  • Spontaneous
    1
  • Genomic Mutations
    5 involving AI839979
  • Find Mice (IMSR)
    0 strains or lines available
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • cDNA Data
    1
Sequences &
Gene Models
less
  • All Sequences
    70
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 100740 NCBI Gene Model | MGI Sequence Detail 1806 C57BL/6J ±  kb
transcript NR_102275 RefSeq | MGI Sequence Detail 1173 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 2
References
more
  • Summaries
    All 31
    Diseases 1
    Phenotypes 21
  • Earliest
    J:5021 Batchelor AL, et al., A comparison of the mutagenic effectiveness of chronic neutron- and gamma-irradiation of mouse spermatogonia. Mutat Res. 1966 Jun;3(3):218-29
  • Latest
    J:125425 Howell GR, et al., Mutation of a ubiquitously expressed mouse transmembrane protein (Tapt1) causes specific skeletal homeotic transformations. Genetics. 2007 Feb;175(2):699-707
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory