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Zmynd12 Gene Detail
Summary
  • Symbol
    Zmynd12
  • Name
    zinc finger, MYND domain containing 12
  • Feature Type
    protein coding gene
  • IDs
    MGI:2140259
    NCBI Gene: 332934
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:119279881-119311096 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 55.38 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    143 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2140259
 protein coding gene Chr4:119279881-119324641 (+)
129S1/SvImJ MGP_129S1SvImJ_G0028699
 protein coding gene Chr4:120620246-120665975 (+)
A/J MGP_AJ_G0028659
 protein coding gene Chr4:115881604-115926716 (+)
AKR/J MGP_AKRJ_G0028612
 protein coding gene Chr4:118399307-118443954 (+)
BALB/cJ MGP_BALBcJ_G0028682
 protein coding gene Chr4:116506065-116552447 (+)
C3H/HeJ MGP_C3HHeJ_G0028397
 protein coding gene Chr4:119961924-120007198 (+)
C57BL/6NJ MGP_C57BL6NJ_G0029123
 protein coding gene Chr4:125195864-125243380 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0026400
 protein coding gene Chr4:109975480-110021462 (+)
CAST/EiJ MGP_CASTEiJ_G0027828
 protein coding gene Chr4:117283391-117332301 (+)
CBA/J MGP_CBAJ_G0028364
 protein coding gene Chr4:128584754-128639503 (+)
DBA/2J MGP_DBA2J_G0028511
 protein coding gene Chr4:116471257-116517008 (+)
FVB/NJ MGP_FVBNJ_G0028477
 protein coding gene Chr4:114990563-115035220 (+)
LP/J MGP_LPJ_G0028611
 protein coding gene Chr4:120736179-120785591 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0028505
 protein coding gene Chr4:133453040-133499640 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0029160
 protein coding gene Chr4:119470500-119517319 (+)
PWK/PhJ MGP_PWKPhJ_G0027551
 protein coding gene Chr4:113392845-113438901 (+)
SPRET/EiJ MGP_SPRETEiJ_G0027377
 protein coding gene Chr4:115886551-115931671 (+)
WSB/EiJ MGP_WSBEiJ_G0027908
 protein coding gene Chr4:119474825-119525095 (+)



Homology
more
  • Human Ortholog
    ZMYND12, zinc finger MYND-type containing 12
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    ZMYND12, zinc finger MYND-type containing 12
  • Links
    NCBI Gene ID: 84217
    neXtProt AC: NX_Q9H0C1
    UniProt: Q9H0C1

  • Chr Location
    1p34.2; chr1:42430329-42456253 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    11 phenotype references
  • All Mutations and Alleles
    8
  • Chemically induced (other)
    2
  • Endonuclease-mediated
    1
  • Gene trapped
    2
  • Radiation induced
    1
  • Targeted
    2
  • Genomic Mutations
    4 involving Zmynd12
  • Incidental Mutations
    APF
  • Find Mice (IMSR)
    9 strains or lines available
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    3
  • GO References
    1
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    3
  • Literature Summary
    1
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 332934 NCBI Gene Model | MGI Sequence Detail 31216 C57BL/6J ±  kb
transcript NM_001014900 RefSeq | MGI Sequence Detail 1505 Not Specified  
polypeptide NP_001014900 RefSeq | MGI Sequence Detail 363 Not Specified  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR011990 Tetratricopeptide-like helical domain superfamily
    IPR002893 Zinc finger, MYND-type
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3

    Microarray probesets 3
References
more
  • Summaries
    All 26
    Developmental Gene Expression 1
    Gene Ontology 1
    Phenotypes 11
  • Earliest
    J:84714 Nishijima I, et al., Two new balancer chromosomes on mouse chromosome 4 to facilitate functional annotation of human chromosome 1p. Genesis. 2003 Jul;36(3):142-8
  • Latest
    J:316108 Saita S, et al., Role of the ANKMY2-FKBP38 axis in regulation of the Sonic hedgehog (Shh) signaling pathway. J Biol Chem. 2014 Sep 12;289(37):25639-54
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory