AI849053 Gene Detail

Summary

• Symbol
  AI849053
• Name
  expressed sequence AI849053

• Feature Type
  lncRNA gene
• IDs
  MGI:2139818
  NCBI Gene: 329697
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr3:88105443-88111926 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  165 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_2139818	lncRNA gene	Chr3:88105443-88111926 (-)
129S1/SvImJ	ENSMUSG00200040262	lncRNA gene	Chr3:84961272-84966766 (-)
A/J	ENSMUSG00195053138	lncRNA gene	Chr3:84982938-84988432 (-)
AKR/J	ENSMUSG00220051575	lncRNA gene	Chr3:84931011-84936505 (-)
BALB/cJ	ENSMUSG00180048665	lncRNA gene	Chr3:85100651-85106147 (-)
C3H/HeJ	ENSMUSG00175049091	lncRNA gene	Chr3:84915956-84921450 (-)
C57BL/6NJ	ENSMUSG00215050771	lncRNA gene	Chr3:85348977-85354471 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0005669	lincRNA gene	Chr3:80973183-80978753 (-)
CAST/EiJ	ENSTCUG00005048183	lncRNA gene	Chr3:84437199-84442772 (-)
CBA/J	ENSMUSG00210048082	lncRNA gene	Chr3:85053655-85059150 (-)
DBA/2J	ENSMUSG00185053176	lncRNA gene	Chr3:85189297-85194791 (-)
FVB/NJ	ENSMUSG00205049760	lncRNA gene	Chr3:83977799-83983296 (-)
JF1/MsJ	ENSUMUG00000052023	lncRNA gene	Chr3:84727530-84733013 (-)
LP/J	ENSMUSG00230037134	lncRNA gene	Chr3:87182664-87188157 (-)
NOD/ShiLtJ	ENSMUSG00190050357	lncRNA gene	Chr3:85430035-85435531 (-)
NZO/HlLtJ	ENSMUSG00225008095	lncRNA gene	Chr3:89938229-89943724 (-)
PWK/PhJ	ENSLUMG00010053000	lncRNA gene	Chr3:84817820-84823267 (-)
SPRET/EiJ	ENSMSPG00010050387	lncRNA gene	Chr3:85657989-85663593 (-)
WSB/EiJ	ENSIUOG00005050961	lncRNA gene	Chr3:85429973-85435523 (-)

Homology

• Gene Tree
  AI849053
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving AI849053
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  597
• cDNA Data
  2

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  31
• RefSeq
  1

• Ensembl
  ENSMUSG00000097280 (Evidence)
• NCBI Gene
  329697

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000097280	Ensembl Gene Model | MGI Sequence Detail	6484	C57BL/6J
transcript	ENSMUST00000181021	Ensembl | MGI Sequence Detail	2658	Not Applicable

Molecular
Reagents

• All nucleic 2

  cDNA 2

  
  

  Microarray probesets 1

References

• Summaries
  All 11

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;