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Rapgef4os2 Gene Detail
Summary
  • Symbol
    Rapgef4os2
  • Name
    Rap guanine nucleotide exchange factor (GEF) 4, opposite strand 2
  • Synonyms
    BB114351
Location &
Maps
more
  • Sequence Map
    Chr2:72055032-72062646 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 43.02 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    313 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2139429
 antisense lncRNA gene Chr2:72055032-72062646 (-)
129S1/SvImJ ENSMUSG00200037066
 lncRNA gene Chr2:69128184-69135803 (-)
A/J ENSMUSG00195023389
 lncRNA gene Chr2:69274744-69282360 (-)
AKR/J ENSMUSG00220040646
 lncRNA gene Chr2:69239404-69247010 (-)
BALB/cJ ENSMUSG00180043186
 lncRNA gene Chr2:69228517-69236133 (-)
C3H/HeJ ENSMUSG00175037562
 lncRNA gene Chr2:69343555-69351174 (-)
C57BL/6NJ ENSMUSG00215032804
 lncRNA gene Chr2:69165488-69173104 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0003201
 antisense lncRNA gene Chr2:66799798-66807395 (-)
CAST/EiJ ENSTCUG00005009268
 lncRNA gene Chr2:68651033-68658729 (-)
CBA/J ENSMUSG00210038528
 lncRNA gene Chr2:69386338-69393957 (-)
DBA/2J ENSMUSG00185041759
 lncRNA gene Chr2:69222075-69229694 (-)
FVB/NJ ENSMUSG00205039091
 lncRNA gene Chr2:68684817-68692433 (-)
JF1/MsJ ENSUMUG00000007029
 lncRNA gene Chr2:68884380-68892000 (-)
LP/J ENSMUSG00230022777
 lncRNA gene Chr2:71028011-71035622 (-)
NOD/ShiLtJ ENSMUSG00190040480
 lncRNA gene Chr2:69307596-69315207 (-)
NZO/HlLtJ ENSMUSG00225015275
 lncRNA gene Chr2:78771511-78779130 (-)
PWK/PhJ ENSLUMG00010034940
 lncRNA gene Chr2:69116419-69124037 (-)
SPRET/EiJ ENSMSPG00010036943
 lncRNA gene Chr2:70518221-70525898 (-)
WSB/EiJ ENSIUOG00005019976
 lncRNA gene Chr2:69349629-69357236 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    15 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
Sequences &
Gene Models
less
  • All Sequences
    22
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000085001 Ensembl Gene Model | MGI Sequence Detail 7615 C57BL/6J ±  kb
transcript ENSMUST00000128165 Ensembl | MGI Sequence Detail 2116 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 21
    Phenotypes 15
  • Earliest
    J:100298 Spitz F, et al., Inversion-induced disruption of the Hoxd cluster leads to the partition of regulatory landscapes. Nat Genet. 2005 Aug;37(8):889-93
  • Latest
    J:373797 Hintermann A, et al., Co-option of an ancestral cloacal regulatory landscape during digit evolution. Nature. 2025 Sep 17;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/15/2026
MGI 6.29 		The Jackson Laboratory