Hspe1-ps4 Pseudogene Detail

Summary

• Symbol
  Hspe1-ps4
• Name
  heat shock protein 1 (chaperonin 10), pseudogene 4
• Synonyms
  10kDa, Cpn10-rs5

• Feature Type
  pseudogene
• IDs
  MGI:1935164
  NCBI Gene: 93751
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr4:138877580-138877625 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 70.57 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  139 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1935164	pseudogene	Chr4:138877508-138878116 (+)
129S1/SvImJ	ENSMUSG00200046257	pseudogene	Chr4:132291619-132292227 (+)
A/J	ENSMUSG00195035817	pseudogene	Chr4:133635082-133635690 (+)
AKR/J	ENSMUSG00220048562	pseudogene	Chr4:132629651-132630260 (+)
BALB/cJ	ENSMUSG00180049523	pseudogene	Chr4:131269352-131269961 (+)
C3H/HeJ	ENSMUSG00175049024	pseudogene	Chr4:132297892-132298501 (+)
C57BL/6NJ	ENSMUSG00215051078	pseudogene	Chr4:133820636-133821244 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011465	pseudogene	Chr4:128833483-128834095 (+)
CAST/EiJ	ENSTCUG00005013854	pseudogene	Chr4:133259041-133259649 (+)
CBA/J	ENSMUSG00210030561	pseudogene	Chr4:131921682-131922291 (+)
DBA/2J	ENSMUSG00185051400	pseudogene	Chr4:133434917-133435526 (+)
FVB/NJ	ENSMUSG00205049193	pseudogene	Chr4:131685552-131686161 (+)
JF1/MsJ	ENSUMUG00000046592	pseudogene	Chr4:134133243-134133851 (+)
LP/J	ENSMUSG00230040962	pseudogene	Chr4:137230201-137230809 (+)
NOD/ShiLtJ	ENSMUSG00190033272	pseudogene	Chr4:131693994-131694602 (+)
NZO/HlLtJ	ENSMUSG00225010536	pseudogene	Chr4:143184916-143185524 (+)
PWK/PhJ	ENSLUMG00010047771	pseudogene	Chr4:131122304-131122913 (+)
SPRET/EiJ	ENSMSPG00010037373	pseudogene	Chr4:133173163-133173771 (+)
WSB/EiJ	ENSIUOG00005044059	pseudogene	Chr4:131580513-131581122 (+)

Homology

• Gene Tree
  Hspe1-ps4
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  2
• Genomic Mutations
  2 involving Hspe1-ps4
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  1

• Ensembl
  ENSMUSG00000083238 (Evidence)
• NCBI Gene
  93751

Representative Sequences			Length	Strain/Species
genomic	93751	NCBI Gene Model | MGI Sequence Detail	46	C57BL/6J

References

• Summaries
  All 9

  Phenotypes 2
• Earliest
  J:69088 Fletcher BH, et al., The murine chaperonin 10 gene family contains an intronless, putative gene for early pregnancy factor, Cpn10-rs1. Mamm Genome. 2001 Feb;12(2):133-40