Hspe1-ps2 Pseudogene Detail

Summary

• Symbol
  Hspe1-ps2
• Name
  heat shock protein 1 (chaperonin 10), pseudogene 2
• Synonyms
  10kDa, Cpn10-rs3

• Feature Type
  pseudogene
• IDs
  MGI:1935162
  NCBI Gene: 93749
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:81446586-81446897 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, 37.64 cM, cytoband D2
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  59 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1935162	pseudogene	Chr12:81446582-81447017 (+)
129S1/SvImJ	ENSMUSG00200051692	pseudogene	Chr12:73416837-73417148 (+)
A/J	ENSMUSG00195034742	pseudogene	Chr12:76110494-76110805 (+)
AKR/J	ENSMUSG00220050101	pseudogene	Chr12:73905856-73906167 (+)
BALB/cJ	ENSMUSG00180025207	pseudogene	Chr12:75081106-75081417 (+)
C3H/HeJ	ENSMUSG00175046212	pseudogene	Chr12:78242598-78242909 (+)
C57BL/6NJ	ENSMUSG00215046121	pseudogene	Chr12:74446627-74446938 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005034171	pseudogene	Chr12:74373551-74373862 (+)
CBA/J	ENSMUSG00210047707	pseudogene	Chr12:74656825-74657136 (+)
DBA/2J	ENSMUSG00185043909	pseudogene	Chr12:76517634-76517945 (+)
FVB/NJ	ENSMUSG00205042426	pseudogene	Chr12:74256782-74257093 (+)
JF1/MsJ	ENSUMUG00000024417	pseudogene	Chr12:80507565-80507876 (+)
LP/J	ENSMUSG00230046351	pseudogene	Chr12:83534836-83535147 (+)
NOD/ShiLtJ	ENSMUSG00190049114	pseudogene	Chr12:73712408-73712719 (+)
NZO/HlLtJ	ENSMUSG00225052129	pseudogene	Chr12:85588316-85588627 (+)
PWK/PhJ	ENSLUMG00010029441	pseudogene	Chr12:74507218-74507529 (+)
SPRET/EiJ	ENSMSPG00010019992	pseudogene	Chr12:76345875-76346186 (+)
WSB/EiJ	ENSIUOG00005045897	pseudogene	Chr12:74328984-74329295 (+)

Homology

• Gene Tree
  Hspe1-ps2
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Hspe1-ps2
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000049246 (Evidence)
• NCBI Gene
  93749

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000049246	Ensembl Gene Model | MGI Sequence Detail	312	C57BL/6J
transcript	ENSMUST00000051437	Ensembl | MGI Sequence Detail	312	Not Applicable

References

• Summaries
  All 9

  Phenotypes 2
• Earliest
  J:69088 Fletcher BH, et al., The murine chaperonin 10 gene family contains an intronless, putative gene for early pregnancy factor, Cpn10-rs1. Mamm Genome. 2001 Feb;12(2):133-40