Hspe1-ps1 Pseudogene Detail

Summary

• Symbol
  Hspe1-ps1
• Name
  heat shock protein 1 (chaperonin 10), pseudogene 1
• Synonyms
  10kDa, Cpn10-rs2, Gm2903

• Feature Type
  pseudogene
• IDs
  MGI:1935161
  NCBI Gene: 100040681
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:68137181-68137848 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, 28.73 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  189 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1935161	pseudogene	Chr12:68137102-68137957 (+)
129S1/SvImJ	ENSMUSG00200004364	pseudogene	Chr12:60070270-60070940 (+)
A/J	ENSMUSG00195015465	pseudogene	Chr12:62755752-62756420 (+)
AKR/J	ENSMUSG00220015859	pseudogene	Chr12:60536214-60536882 (+)
BALB/cJ	ENSMUSG00180036683	pseudogene	Chr12:61754848-61755516 (+)
C3H/HeJ	ENSMUSG00175029875	pseudogene	Chr12:64849326-64849993 (+)
C57BL/6NJ	ENSMUSG00215035864	pseudogene	Chr12:61103046-61103714 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005012461	pseudogene	Chr12:61127011-61127688 (+)
CBA/J	ENSMUSG00210031294	pseudogene	Chr12:61319329-61319996 (+)
DBA/2J	ENSMUSG00185004840	pseudogene	Chr12:63198678-63199344 (+)
FVB/NJ	ENSMUSG00205035254	pseudogene	Chr12:60937805-60938475 (+)
JF1/MsJ	ENSUMUG00000031208	pseudogene	Chr12:67165329-67166004 (+)
LP/J	ENSMUSG00230012091	pseudogene	Chr12:70204569-70205235 (+)
NOD/ShiLtJ	ENSMUSG00190007102	pseudogene	Chr12:60294169-60294837 (+)
NZO/HlLtJ	ENSMUSG00225029825	pseudogene	Chr12:72271797-72272463 (+)
PWK/PhJ	ENSLUMG00010034293	pseudogene	Chr12:61231753-61232420 (+)
SPRET/EiJ	ENSMSPG00010030153	pseudogene	Chr12:62948383-62949052 (+)
WSB/EiJ	ENSIUOG00005001057	pseudogene	Chr12:61020834-61021495 (+)

Homology

• Gene Tree
  Hspe1-ps1
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Hspe1-ps1
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000113674 (Evidence)
• NCBI Gene
  100040681

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000113674	Ensembl Gene Model | MGI Sequence Detail	668	C57BL/6J
transcript	ENSMUST00000222955	Ensembl | MGI Sequence Detail	330	Not Applicable

Other
Accession IDs

MGI:3781081

References

• Summaries
  All 8

  Phenotypes 2
• Earliest
  J:69088 Fletcher BH, et al., The murine chaperonin 10 gene family contains an intronless, putative gene for early pregnancy factor, Cpn10-rs1. Mamm Genome. 2001 Feb;12(2):133-40