Ifngas1 Gene Detail

Summary

• Symbol
  Ifngas1
• Name
  Ifng antisense RNA 1
• Synonyms
  Tmevpg1

• Feature Type
  antisense lncRNA gene
  BioType Conflict
  
• IDs
  MGI:1934663
  NCBI Gene: 103214
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr10:118337940-118392430 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  4 experiments

Strain
Comparison

• SNPs within 2kb
  2397 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1934663	antisense lncRNA gene	Chr10:118337792-118432246 (-)
129S1/SvImJ	ENSMUSG00200026577	lncRNA gene	Chr10:114688122-114742538 (-)
A/J	ENSMUSG00195022259	lncRNA gene	Chr10:115101728-115156092 (-)
AKR/J	ENSMUSG00220014939	lncRNA gene	Chr10:114714421-114768830 (-)
BALB/cJ	ENSMUSG00180018386	lncRNA gene	Chr10:115114610-115168970 (-)
C3H/HeJ	ENSMUSG00175025258	lncRNA gene	Chr10:115092862-115147279 (-)
C57BL/6NJ	ENSMUSG00215016167	lncRNA gene	Chr10:114746120-114800675 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005033424	lncRNA gene	Chr10:114089944-114143668 (-)
CBA/J	ENSMUSG00210021384	lncRNA gene	Chr10:114942511-114996903 (-)
DBA/2J	ENSMUSG00185009041	lncRNA gene	Chr10:115065953-115120296 (-)
FVB/NJ	ENSMUSG00205025040	lncRNA gene	Chr10:114360326-114414880 (-)
JF1/MsJ	ENSUMUG00000026668	lncRNA gene	Chr10:116332506-116388774 (-)
LP/J	ENSMUSG00230025754	lncRNA gene	Chr10:117015415-117069807 (-)
NOD/ShiLtJ	ENSMUSG00190019709	lncRNA gene	Chr10:115161915-115216261 (-)
NZO/HlLtJ	ENSMUSG00225019285	lncRNA gene	Chr10:121268911-121323348 (-)
PWK/PhJ	ENSLUMG00010013949	lncRNA gene	Chr10:114737281-114792035 (-)
SPRET/EiJ	ENSMSPG00010016051	lncRNA gene	Chr10:116645768-116700838 (-)
WSB/EiJ	ENSIUOG00005014591	lncRNA gene	Chr10:114786470-114840916 (-)

Homology

• Human Ortholog
  IFNG-AS1, IFNG regulatory antisense RNA 1

• Vertebrate Orthologs
  1

Vertebrate Orthology Source

Alliance of Genome Resources

• Human Ortholog
  IFNG-AS1, IFNG regulatory antisense RNA 1
  
• Synonyms
  GS1-410F4.2, NEST, Tmevpg1
• Links
  HGNC:43910

  NCBI Gene ID: 100885789

  
  
• Chr Location
  12q15; chr12:67989446-68234686 (+)  GRCh38

---

• MGI Vertebrate Homology
  Ifngas1 stringent orthology
  1 human;1 mouse
  
• HCOP
  vertebrate homology predictions: IFNG-AS1
• Gene Tree
  Ifngas1
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  7 phenotype references
  

• All Mutations and Alleles
  4
• Chemically induced (other)
  1
• Endonuclease-mediated
  2
• Targeted
  1
• Genomic Mutations
  1 involving Ifngas1
• Find Mice (IMSR)
  1 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  49
• RefSeq
  1

• Ensembl
  ENSMUSG00000112230 (Evidence)
• NCBI Gene
  103214

Representative Sequences			Length	Strain/Species
genomic	103214	NCBI Gene Model | MGI Sequence Detail	54491	C57BL/6J
transcript	NR_104123	RefSeq | MGI Sequence Detail	1121	ZRU/MplStud

Molecular
Reagents

• All nucleic 2

  cDNA 2

  
  

  Microarray probesets 1

Other
Accession IDs

MGI:2143600, MGI:5829803

References

• Summaries
  All 19

  Phenotypes 7
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:326541 Cyagen Biosciences Inc., Cyagen Biosciences Website. 2022;

TSS for Ifngas1:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr99499	Chr10:118392431-118392447 (-)	-9 bp