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Cfap20dc Gene Detail
Summary
  • Symbol
    Cfap20dc
  • Name
    CFAP20 domain containing
  • Synonyms
    4930452B06Rik, 4933406L09Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1926154
    NCBI Gene: 74430
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr14:13803533-14038581 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 14, 4.87 cM, cytoband A1
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    1643 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1926154
 protein coding gene Chr14:13803434-14038602 (+)
129S1/SvImJ MGP_129S1SvImJ_G0020994
 protein coding gene Chr14:776396-1016128 (-)
A/J MGP_AJ_G0020942
 protein coding gene Chr14:744175-974301 (-)
AKR/J MGP_AKRJ_G0020919
 protein coding gene Chr14:762355-1002663 (-)
BALB/cJ MGP_BALBcJ_G0020944
 protein coding gene Chr14:743936-973845 (-)
C3H/HeJ MGP_C3HHeJ_G0020729
 protein coding gene Chr14:761492-998472 (-)
C57BL/6NJ MGP_C57BL6NJ_G0021378
 protein coding gene Chr14:799668-1045424 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0018947
 protein coding gene Chr14:1655701-1899274 (-)
CAST/EiJ MGP_CASTEiJ_G0020251
 protein coding gene Chr14:770777-1017363 (-)
CBA/J MGP_CBAJ_G0020695
 protein coding gene Chr14:823271-1081479 (-)
DBA/2J MGP_DBA2J_G0020818
 protein coding gene Chr14:733097-966848 (-)
FVB/NJ MGP_FVBNJ_G0020800
 protein coding gene Chr14:735471-961754 (-)
LP/J MGP_LPJ_G0020895
 protein coding gene Chr14:764033-999595 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0020826
 protein coding gene Chr14:800765-1041021 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0021411
 protein coding gene Chr14:750296-986222 (-)
PWK/PhJ MGP_PWKPhJ_G0020003
 protein coding gene Chr14:763111-993883 (-)
SPRET/EiJ MGP_SPRETEiJ_G0019824
 protein coding gene Chr14:779157-1024713 (-)
WSB/EiJ MGP_WSBEiJ_G0020309
 protein coding gene Chr14:768332-1009209 (-)



Homology
more
  • Human Ortholog
    CFAP20DC, CFAP20 domain containing
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CFAP20DC, CFAP20 domain containing
  • Synonyms
    C3orf67
  • Links
    NCBI Gene ID: 200844
    neXtProt AC: NX_Q6ZVT6
    UniProt: Q6ZVT6

  • Chr Location
    3p14.2; chr3:58716173-59050084 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    715
  • Tissues
    1
  • cDNA Data
    14
  • Literature Summary
    1
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000021747 Ensembl Gene Model | MGI Sequence Detail 235049 C57BL/6J ±  kb
transcript ENSMUST00000102996 Ensembl | MGI Sequence Detail 2681 Not Applicable  
polypeptide ENSMUSP00000100061 Ensembl | MGI Sequence Detail 674 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR007714 CFA20 domain
    IPR040441 Cilia- and flagella-associated protein 20/CFAP20DC
Molecular
Reagents
less
  • All nucleic 14
    cDNA 14

    Microarray probesets 6
Other
Accession IDs
less
MGI:1921680, MGI:2145703
References
more
  • Summaries
    All 25
    Developmental Gene Expression 1
    Phenotypes 4
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/19/2023
MGI 6.22 		The Jackson Laboratory