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9530097N15Rik Gene Detail
Summary
  • Symbol
    9530097N15Rik
  • Name
    RIKEN cDNA 9530097N15 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1925995
    NCBI Gene: 78745
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr3:103985751-103986818 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 3, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    7 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1925995
 lncRNA gene Chr3:103985751-103986818 (-)
129S1/SvImJ MGP_129S1SvImJ_G0036978
 sense intronic lncRNA gene Chr3:105382216-105383283 (-)
A/J MGP_AJ_G0036966
 sense intronic lncRNA gene Chr3:102030782-102031849 (-)
AKR/J MGP_AKRJ_G0036913
 sense intronic lncRNA gene Chr3:104519183-104520250 (-)
BALB/cJ MGP_BALBcJ_G0036957
 sense intronic lncRNA gene Chr3:101799738-101800803 (-)
C3H/HeJ MGP_C3HHeJ_G0036643
 sense intronic lncRNA gene Chr3:104896768-104897835 (-)
C57BL/6NJ MGP_C57BL6NJ_G0037469
 sense intronic lncRNA gene Chr3:109289179-109290246 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0034524
 sense intronic lncRNA gene Chr3:98162015-98165776 (-)
CAST/EiJ MGP_CASTEiJ_G0035832
 sense intronic lncRNA gene Chr3:104005113-104006180 (-)
CBA/J MGP_CBAJ_G0036618
 sense intronic lncRNA gene Chr3:113024882-113025949 (-)
DBA/2J MGP_DBA2J_G0036793
 sense intronic lncRNA gene Chr3:101274054-101275121 (-)
FVB/NJ MGP_FVBNJ_G0036743
 sense intronic lncRNA gene Chr3:99204250-99205317 (-)
LP/J MGP_LPJ_G0036841
 sense intronic lncRNA gene Chr3:106718684-106719751 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0036751
 sense intronic lncRNA gene Chr3:119158892-119160005 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0037587
 sense intronic lncRNA gene Chr3:104076758-104077823 (-)
PWK/PhJ MGP_PWKPhJ_G0035524
 sense intronic lncRNA gene Chr3:101052583-101053648 (-)
SPRET/EiJ MGP_SPRETEiJ_G0035336
 sense intronic lncRNA gene Chr3:102144318-102145381 (-)
WSB/EiJ MGP_WSBEiJ_G0036032
 sense intronic lncRNA gene Chr3:104637985-104639052 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    1
Sequences &
Gene Models
less
  • All Sequences
    22
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000106371 Ensembl Gene Model | MGI Sequence Detail 1068 C57BL/6J ±  kb
transcript ENSMUST00000197819 Ensembl | MGI Sequence Detail 1068 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 1
References
more
  • Summaries
    All 10
    Phenotypes 2
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory