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9530036M11Rik Gene Detail
Summary
  • Symbol
    9530036M11Rik
  • Name
    RIKEN cDNA 9530036M11 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1925866
    NCBI Gene: 78616
  • Alliance
    genome feature page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:54123872-54127922 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 26.77 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    252 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1925866
 lncRNA gene Chr6:54114920-54129472 (-)
129S1/SvImJ ENSMUSG00200006175
 lncRNA gene Chr6:51100535-51104579 (-)
A/J ENSMUSG00195033796
 lncRNA gene Chr6:50837685-50841729 (-)
AKR/J ENSMUSG00220004777
 lncRNA gene Chr6:50534076-50538120 (-)
BALB/cJ ENSMUSG00180010636
 lncRNA gene Chr6:51131678-51135722 (-)
C3H/HeJ ENSMUSG00175040647
 lncRNA gene Chr6:50892840-50896884 (-)
C57BL/6NJ ENSMUSG00215026868
 lncRNA gene Chr6:51108119-51112169 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0003862
 antisense lncRNA gene Chr6:48622724-48626746 (-)
CAST/EiJ ENSTCUG00005005241
 lncRNA gene Chr6:50372998-50377039 (-)
CBA/J ENSMUSG00210034732
 lncRNA gene Chr6:50937157-50941201 (-)
DBA/2J ENSMUSG00185019742
 lncRNA gene Chr6:51516796-51520840 (-)
FVB/NJ ENSMUSG00205030347
 lncRNA gene Chr6:51166702-51170746 (-)
JF1/MsJ ENSUMUG00000035288
 lncRNA gene Chr6:50892034-50896077 (-)
LP/J ENSMUSG00230013509
 lncRNA gene Chr6:52597677-52601721 (-)
NOD/ShiLtJ ENSMUSG00190008852
 lncRNA gene Chr6:50848354-50852398 (-)
NZO/HlLtJ ENSMUSG00225013596
 lncRNA gene Chr6:54580596-54584645 (-)
PWK/PhJ ENSLUMG00010023272
 lncRNA gene Chr6:50629481-50633524 (-)
SPRET/EiJ ENSMSPG00010009130
 lncRNA gene Chr6:51238735-51242768 (-)
WSB/EiJ ENSIUOG00005021250
 lncRNA gene Chr6:51184919-51188960 (-)



Homology
less
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • cDNA Data
    2
Sequences &
Gene Models
less
  • All Sequences
    35
  • RefSeq
    11
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000087670 Ensembl Gene Model | MGI Sequence Detail 4051 C57BL/6J ±  kb
transcript ENSMUST00000138767 Ensembl | MGI Sequence Detail 1996 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2

    Microarray probesets 1
References
more
  • Summaries
    All 10
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory