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Msantd4 Gene Detail
Summary
  • Symbol
    Msantd4
  • Name
    Myb/SANT-like DNA-binding domain containing 4 with coiled-coils
  • Synonyms
    8430410K20Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1925350
    NCBI Gene: 78100
  • Alliance
    genome feature page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:4376562-4386870 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 9, 2.46 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    321 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1925350
 protein coding gene Chr9:4376552-4386890 (+)
129S1/SvImJ ENSMUSG00200022466
 protein coding gene Chr9:1206960-1216313 (+)
A/J ENSMUSG00195017701
 protein coding gene Chr9:1135674-1145983 (+)
AKR/J ENSMUSG00220018546
 protein coding gene Chr9:1263961-1274287 (+)
BALB/cJ ENSMUSG00180011334
 protein coding gene Chr9:1276309-1286618 (+)
C3H/HeJ ENSMUSG00175023073
 protein coding gene Chr9:1198352-1208660 (+)
C57BL/6NJ ENSMUSG00215005720
 protein coding gene Chr9:1212163-1222472 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0031741
 protein coding gene Chr9:880175-883496 (+)
CAST/EiJ ENSTCUG00005007123
 protein coding gene Chr9:1302480-1312738 (+)
CBA/J ENSMUSG00210010575
 protein coding gene Chr9:1143468-1152823 (+)
DBA/2J ENSMUSG00185005059
 protein coding gene Chr9:1344304-1354613 (+)
FVB/NJ ENSMUSG00205006810
 protein coding gene Chr9:1318300-1328609 (+)
JF1/MsJ ENSUMUG00000008147
 protein coding gene Chr9:1328490-1337842 (+)
LP/J ENSMUSG00230003489
 protein coding gene Chr9:1797511-1806866 (+)
NOD/ShiLtJ ENSMUSG00190021258
 protein coding gene Chr9:1234345-1243701 (+)
NZO/HlLtJ ENSMUSG00225016792
 protein coding gene Chr9:1676493-1686801 (+)
PWK/PhJ ENSLUMG00010006426
 protein coding gene Chr9:1293122-1302472 (+)
SPRET/EiJ ENSMSPG00010005294
 protein coding gene Chr9:1323004-1339690 (+)
WSB/EiJ ENSIUOG00005007316
 protein coding gene Chr9:1120885-1131209 (+)



Homology
more
  • Human Ortholog
    MSANTD4, Myb/SANT DNA binding domain containing 4 with coiled-coils
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    MSANTD4, Myb/SANT DNA binding domain containing 4 with coiled-coils
  • Synonyms
    KIAA1826
  • Links
    NCBI Gene ID: 84437
    UniProt: Q8NCY6

  • Chr Location
    11q22.3; chr11:105995623-106022410 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    2
  • GO References
    2
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • cDNA Data
    61
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000041124 Ensembl Gene Model | MGI Sequence Detail 10309 C57BL/6J ±  kb
transcript ENSMUST00000047173 Ensembl | MGI Sequence Detail 2731 Not Applicable  
polypeptide ENSMUSP00000038267 Ensembl | MGI Sequence Detail 345 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • Protein Ontology
    PR:000031338 Myb/SANT-like DNA-binding domain-containing protein 4
    (term hierarchy)
  • InterPro Domains
    IPR028002 Myb/SANT-like DNA-binding domain 5
    IPR026162 Myb/SANT-like DNA-binding domain-containing protein 4
Molecular
Reagents
less
  • All nucleic 61
    cDNA 61

    Microarray probesets 4
References
more
  • Summaries
    All 26
    Gene Ontology 2
    Phenotypes 4
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory