4930469B13Rik Gene Detail

Summary

• Symbol
  4930469B13Rik
• Name
  RIKEN cDNA 4930469B13 gene

• Feature Type
  lncRNA gene
• IDs
  MGI:1925259
  NCBI Gene: 78009
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr14:19665198-19678700 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, 10.24 cM
• Mapping Data
  2 experiments

Strain
Comparison

• SNPs within 2kb
  269 from dbSNP Build 142
• Strain Annotations
  35

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1925259	lncRNA gene	Chr14:19665198-19678700 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	ENSMUSG00220030111	lncRNA gene	Chr14:11633186-11634234 (-)
AKR/J	ENSMUSG00220026524	lncRNA gene	Chr14:11667954-11681430 (+)
BALB/cJ	ENSMUSG00180040781	lncRNA gene	Chr14:11630297-11643802 (+)
C3H/HeJ	ENSMUSG00175023412	lncRNA gene	Chr14:11693435-11706932 (+)
C57BL/6NJ	ENSMUSG00215032467	lncRNA gene	Chr14:11882967-11896471 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	ENSMUSG00210027767	lncRNA gene	Chr14:11917727-11931223 (+)
DBA/2J	ENSMUSG00185041946	lncRNA gene	Chr14:12925103-12926146 (-)
DBA/2J	ENSMUSG00185042135	lncRNA gene	Chr14:13943170-13944213 (-)
DBA/2J	ENSMUSG00185042211	lncRNA gene	Chr14:14252716-14253759 (+)
DBA/2J	ENSMUSG00185042278	lncRNA gene	Chr14:14598719-14599761 (+)
DBA/2J	ENSMUSG00185042345	lncRNA gene	Chr14:14676701-14677743 (+)
DBA/2J	ENSMUSG00185039288	lncRNA gene	Chr14:16202754-16216256 (+)
DBA/2J	ENSMUSG00185042087	lncRNA gene	Chr14:13250014-13251057 (-)
FVB/NJ	ENSMUSG00205042218	lncRNA gene	Chr14:11758361-11771843 (+)
JF1/MsJ	no annotation
LP/J	ENSMUSG00230017135	lncRNA gene	Chr14:18614921-18615966 (-)
LP/J	ENSMUSG00230041707	lncRNA gene	Chr14:22459210-22460253 (-)
LP/J	ENSMUSG00230041632	lncRNA gene	Chr14:21487197-21488239 (-)
LP/J	ENSMUSG00230017327	lncRNA gene	Chr14:20534997-20536040 (-)
LP/J	ENSMUSG00230017167	lncRNA gene	Chr14:19189697-19190742 (-)
LP/J	ENSMUSG00230039686	lncRNA gene	Chr14:23484677-23498159 (+)
LP/J	ENSMUSG00230017082	lncRNA gene	Chr14:17685381-17686426 (-)
LP/J	ENSMUSG00230017004	lncRNA gene	Chr14:13917348-13918393 (-)
LP/J	ENSMUSG00230041705	lncRNA gene	Chr14:22253396-22254439 (-)
LP/J	ENSMUSG00230016981	lncRNA gene	Chr14:13762684-13763729 (-)
NOD/ShiLtJ	ENSMUSG00190040638	lncRNA gene	Chr14:11916716-11930176 (+)
NZO/HlLtJ	ENSMUSG00225037318	lncRNA gene	Chr14:15269363-15270406 (+)
NZO/HlLtJ	ENSMUSG00225037431	lncRNA gene	Chr14:17506772-17507817 (+)
NZO/HlLtJ	ENSMUSG00225037233	lncRNA gene	Chr14:13441478-13442521 (-)
NZO/HlLtJ	ENSMUSG00225037399	lncRNA gene	Chr14:16763087-16764130 (-)
NZO/HlLtJ	ENSMUSG00225036393	lncRNA gene	Chr14:17724155-17737631 (+)
NZO/HlLtJ	ENSMUSG00225037364	lncRNA gene	Chr14:16022548-16023590 (-)
NZO/HlLtJ	ENSMUSG00225037414	lncRNA gene	Chr14:17129399-17130444 (-)
NZO/HlLtJ	ENSMUSG00225037283	lncRNA gene	Chr14:14721148-14722190 (-)
PWK/PhJ	no annotation
SPRET/EiJ	ENSMSPG00010035495	lncRNA gene	Chr14:13519667-13533049 (+)
WSB/EiJ	no annotation

Homology

• Gene Tree
  4930469B13Rik
  

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  39

• Ensembl
  ENSMUSG00000068776 (Evidence)
• NCBI Gene
  78009

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000068776	Ensembl Gene Model | MGI Sequence Detail	13503	C57BL/6J
transcript	ENSMUST00000224808	Ensembl | MGI Sequence Detail	348	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

  
  

  Microarray probesets 1

Other
Accession IDs

MGI:3642496

References

• Summaries
  All 7
• Earliest
  J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90