A930019D19Rik Gene Detail

Summary

• Symbol
  A930019D19Rik
• Name
  RIKEN cDNA A930019D19 gene

• Feature Type
  lncRNA gene
• IDs
  MGI:1925056
  NCBI Gene: 77806
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr2:146101206-146109080 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 71.33 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  181 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1925056	lncRNA gene	Chr2:146101206-146109080 (+)
129S1/SvImJ	ENSMUSG00200031034	lncRNA gene	Chr2:143213705-143221579 (+)
A/J	ENSMUSG00195022967	lncRNA gene	Chr2:143333410-143341290 (+)
AKR/J	ENSMUSG00220045937	lncRNA gene	Chr2:142922531-142930405 (+)
BALB/cJ	ENSMUSG00180045750	lncRNA gene	Chr2:142995238-143003118 (+)
C3H/HeJ	ENSMUSG00175046986	lncRNA gene	Chr2:143542263-143550143 (+)
C57BL/6NJ	ENSMUSG00215037107	lncRNA gene	Chr2:143063350-143071224 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003275	antisense lncRNA gene	Chr2:138458034-138465915 (+)
CAST/EiJ	ENSTCUG00005043444	lncRNA gene	Chr2:142189817-142197697 (+)
CBA/J	ENSMUSG00210045837	lncRNA gene	Chr2:143461454-143469334 (+)
DBA/2J	ENSMUSG00185049367	lncRNA gene	Chr2:143092262-143100136 (+)
FVB/NJ	ENSMUSG00205039958	lncRNA gene	Chr2:142266580-142274460 (+)
JF1/MsJ	ENSUMUG00000046115	lncRNA gene	Chr2:142881790-142889664 (+)
LP/J	ENSMUSG00230036039	lncRNA gene	Chr2:144796223-144804097 (+)
NOD/ShiLtJ	ENSMUSG00190044842	lncRNA gene	Chr2:143133439-143141319 (+)
NZO/HlLtJ	ENSMUSG00225001294	lncRNA gene	Chr2:152784622-152792496 (+)
PWK/PhJ	ENSLUMG00010041583	lncRNA gene	Chr2:142908692-142916567 (+)
SPRET/EiJ	ENSMSPG00010030632	lncRNA gene	Chr2:145389909-145397814 (+)
WSB/EiJ	ENSIUOG00005047292	lncRNA gene	Chr2:142915580-142923461 (+)

Homology

• Gene Tree
  A930019D19Rik
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving A930019D19Rik
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  597
• cDNA Data
  2

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  1

• Ensembl
  ENSMUSG00000085958 (Evidence)
• NCBI Gene
  77806

Representative Sequences			Length	Strain/Species
genomic	77806	NCBI Gene Model | MGI Sequence Detail	7875	C57BL/6J
transcript	NR_040619	RefSeq | MGI Sequence Detail	958	C57BL/6

Molecular
Reagents

• All nucleic 2

  cDNA 2

References

• Summaries
  All 12

  Phenotypes 3
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
• Latest
  J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573