C030015A19Rik Gene Detail

Summary

• Symbol
  C030015A19Rik
• Name
  RIKEN cDNA C030015A19 gene

• Feature Type
  lncRNA gene
• IDs
  MGI:1924668
  NCBI Gene: 77418
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr6:90363789-90366339 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  146 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1924668	lncRNA gene	Chr6:90363789-90366339 (+)
129S1/SvImJ	ENSMUSG00200044993	unclassified gene	Chr6:87309441-87311991 (+)
A/J	ENSMUSG00195040557	unclassified gene	Chr6:87031548-87034098 (+)
AKR/J	ENSMUSG00220035902	unclassified gene	Chr6:85935709-85938259 (+)
BALB/cJ	ENSMUSG00180020694	unclassified gene	Chr6:87397884-87400434 (+)
C3H/HeJ	ENSMUSG00175025739	unclassified gene	Chr6:90032514-90035064 (-)
C57BL/6NJ	ENSMUSG00215034751	unclassified gene	Chr6:87398746-87401296 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0001750	unclassified gene	Chr6:86414046-86416617 (+)
CAST/EiJ	ENSTCUG00005018222	unclassified gene	Chr6:87517832-87520395 (+)
CBA/J	ENSMUSG00210044624	unclassified gene	Chr6:87185155-87187705 (+)
DBA/2J	ENSMUSG00185045032	unclassified gene	Chr6:87732515-87735065 (+)
FVB/NJ	ENSMUSG00205044940	unclassified gene	Chr6:86365588-86368138 (+)
JF1/MsJ	ENSUMUG00000049743	unclassified gene	Chr6:86673482-86676039 (+)
LP/J	ENSMUSG00230050814	unclassified gene	Chr6:88867199-88869749 (+)
NOD/ShiLtJ	ENSMUSG00190043699	unclassified gene	Chr6:86804321-86806871 (+)
NZO/HlLtJ	ENSMUSG00225019799	unclassified gene	Chr6:90873473-90876033 (+)
PWK/PhJ	ENSLUMG00010034898	unclassified gene	Chr6:86097820-86100370 (+)
SPRET/EiJ	ENSMSPG00010043311	unclassified gene	Chr6:88360307-88362863 (+)
WSB/EiJ	ENSIUOG00005035339	unclassified gene	Chr6:87801228-87803795 (+)

Homology

• Gene Tree
  C030015A19Rik
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  11 phenotype references
  

• All Mutations and Alleles
  2
• Radiation induced
  1
• Spontaneous
  1
• Genomic Mutations
  2 involving C030015A19Rik
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  3

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23

• Ensembl
  ENSMUSG00000108181 (Evidence)
• NCBI Gene
  77418

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000108181	Ensembl Gene Model | MGI Sequence Detail	2551	C57BL/6J
transcript	AK028820	GenBank | ENA | DDBJ | MGI Sequence Detail	2561	C57BL/6J

Molecular
Reagents

• All nucleic 3

  cDNA 3

  
  

  Microarray probesets 1

References

• Summaries
  All 19

  Phenotypes 11
• Earliest
  J:21726 Champion KM, et al., Identification of a heritable deficiency of the folate-dependent enzyme 10-formyltetrahydrofolate dehydrogenase in mice. Proc Natl Acad Sci U S A. 1994 Nov 22;91(24):11338-42
• Latest
  J:386463 Rias E, et al., Protocol for isolation of total RNA from mouse whole cochlea using organic solvents. STAR Protoc. 2026 Mar 20;7(1):104376