C030015E24Rik Gene Detail

Summary

• Symbol
  C030015E24Rik
• Name
  RIKEN cDNA C030015E24 gene

• Feature Type
  lncRNA gene
• IDs
  MGI:1924665
  NCBI Gene: 77415
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr5:49155054-49155881 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  116 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1924665	lncRNA gene	Chr5:49155054-49155881 (-)
129S1/SvImJ	ENSMUSG00200001235	unclassified gene	Chr5:44676477-44677304 (-)
A/J	ENSMUSG00195016202	unclassified gene	Chr5:44081235-44082062 (-)
AKR/J	ENSMUSG00220000680	unclassified gene	Chr5:44139298-44140125 (-)
BALB/cJ	ENSMUSG00180006893	unclassified gene	Chr5:43881392-43882219 (-)
C3H/HeJ	ENSMUSG00175015327	unclassified gene	Chr5:45894797-45895624 (-)
C57BL/6NJ	ENSMUSG00215001824	unclassified gene	Chr5:44619551-44620378 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0001291	unclassified gene	Chr5:43093325-43094166 (-)
CAST/EiJ	ENSTCUG00005003314	unclassified gene	Chr5:44029249-44030091 (-)
CBA/J	ENSMUSG00210024491	unclassified gene	Chr5:44830308-44831135 (-)
DBA/2J	ENSMUSG00185001817	unclassified gene	Chr5:46708654-46709481 (-)
FVB/NJ	ENSMUSG00205003157	unclassified gene	Chr5:43669784-43670611 (-)
JF1/MsJ	ENSUMUG00000000619	unclassified gene	Chr5:51305525-51306352 (-)
LP/J	ENSMUSG00230011139	unclassified gene	Chr5:51360968-51361795 (-)
NOD/ShiLtJ	ENSMUSG00190000920	unclassified gene	Chr5:43780268-43781095 (-)
NZO/HlLtJ	ENSMUSG00225028791	unclassified gene	Chr5:56511489-56512316 (-)
PWK/PhJ	ENSLUMG00010001502	unclassified gene	Chr5:43938858-43939684 (-)
SPRET/EiJ	ENSMSPG00010013005	unclassified gene	Chr5:45338914-45339757 (-)
WSB/EiJ	ENSIUOG00005019821	unclassified gene	Chr5:46769464-46770291 (-)

Homology

• Gene Tree
  C030015E24Rik
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  14 phenotype references
  

• All Mutations and Alleles
  2
• Radiation induced
  2
• Genomic Mutations
  2 involving C030015E24Rik
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000106469 (Evidence)
• NCBI Gene
  77415

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000106469	Ensembl Gene Model | MGI Sequence Detail	828	C57BL/6J
transcript	AK021085	GenBank | ENA | DDBJ | MGI Sequence Detail	828	C57BL/6J

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 20

  Diseases 1

  Phenotypes 14
• Earliest
  J:5021 Batchelor AL, et al., A comparison of the mutagenic effectiveness of chronic neutron- and gamma-irradiation of mouse spermatogonia. Mutat Res. 1966 Jun;3(3):218-29
• Latest
  J:125425 Howell GR, et al., Mutation of a ubiquitously expressed mouse transmembrane protein (Tapt1) causes specific skeletal homeotic transformations. Genetics. 2007 Feb;175(2):699-707