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9530026P05Rik Gene Detail
Summary
  • Symbol
    9530026P05Rik
  • Name
    RIKEN cDNA 9530026P05 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1924659
    NCBI Gene: 330385
  • Alliance
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:92917563-93088730 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
  • Genetic Map
    Chromosome 6, 41.84 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    1724 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1924659
lncRNA gene Chr6:92917310-93249970 (+)
129S1/SvImJ MGP_129S1SvImJ_G0004324
antisense lncRNA gene Chr6:94617948-94964168 (+)
A/J MGP_AJ_G0004302
antisense lncRNA gene Chr6:91019196-91358936 (+)
AKR/J MGP_AKRJ_G0004284
antisense lncRNA gene Chr6:93529759-93879516 (+)
BALB/cJ MGP_BALBcJ_G0004288
antisense lncRNA gene Chr6:90970361-91312075 (+)
C3H/HeJ MGP_C3HHeJ_G0004217
antisense lncRNA gene Chr6:90563824-90909263 (-)
C57BL/6NJ MGP_C57BL6NJ_G0004437
antisense lncRNA gene Chr6:97036685-97395369 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0003905
antisense lncRNA gene Chr6:88990372-89326628 (+)
CAST/EiJ MGP_CASTEiJ_G0004198
antisense lncRNA gene Chr6:93674275-94018504 (+)
CBA/J MGP_CBAJ_G0004230
antisense lncRNA gene Chr6:100659139-101033429 (+)
DBA/2J MGP_DBA2J_G0004246
antisense lncRNA gene Chr6:90181842-90519660 (+)
FVB/NJ MGP_FVBNJ_G0004262
antisense lncRNA gene Chr6:89402139-89737446 (+)
LP/J MGP_LPJ_G0004325
antisense lncRNA gene Chr6:94569078-94931662 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0004253
antisense lncRNA gene Chr6:104671735-105037925 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0004435
antisense lncRNA gene Chr6:93388422-93736422 (+)
PWK/PhJ MGP_PWKPhJ_G0004151
antisense lncRNA gene Chr6:89160047-89502464 (+)
SPRET/EiJ MGP_SPRETEiJ_G0004094
antisense lncRNA gene Chr6:92307199-92666229 (+)
WSB/EiJ MGP_WSBEiJ_G0004235
antisense lncRNA gene Chr6:93857814-94205527 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Sequences &
Gene Models
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  • All Sequences
  • RefSeq
Representative SequencesLengthStrain/SpeciesFlank
genomic 330385 NCBI Gene Model | MGI Sequence Detail 171168 C57BL/6J ±  kb
transcript NR_015530 RefSeq | MGI Sequence Detail 995 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 9
    Genomic 2
    cDNA 7

    Microarray probesets 1
References
more
  • Summaries
    All 17
    Phenotypes 4
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:330636 Iwata S, et al., An efficient i-GONAD method for creating and maintaining lethal mutant mice using an inversion balancer identified from the C3H/HeJJcl strain. G3 (Bethesda). 2021;11(8)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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last database update
03/19/2024
MGI 6.23
The Jackson Laboratory