9530004M14Rik Gene Detail

Summary

• Symbol
  9530004M14Rik
• Name
  RIKEN cDNA 9530004M14 gene

• Feature Type
  lncRNA gene
• IDs
  MGI:1924620
  NCBI Gene: 77370
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr8:83128529-83130553 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  151 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1924620	lncRNA gene	Chr8:83128529-83130553 (+)
129S1/SvImJ	ENSMUSG00200026124	lncRNA gene	Chr8:77521881-77523695 (+)
A/J	ENSMUSG00195018672	lncRNA gene	Chr8:77861711-77863525 (+)
AKR/J	ENSMUSG00220024355	lncRNA gene	Chr8:77918646-77920460 (+)
BALB/cJ	ENSMUSG00180022147	lncRNA gene	Chr8:77720454-77722268 (+)
C3H/HeJ	ENSMUSG00175011675	lncRNA gene	Chr8:77792977-77794791 (+)
C57BL/6NJ	ENSMUSG00215022810	lncRNA gene	Chr8:77421925-77423746 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005036899	lncRNA gene	Chr8:77314447-77316260 (+)
CBA/J	ENSMUSG00210020774	lncRNA gene	Chr8:77785090-77786904 (+)
DBA/2J	ENSMUSG00185038109	lncRNA gene	Chr8:83894304-83896118 (+)
FVB/NJ	ENSMUSG00205043164	lncRNA gene	Chr8:76828795-76830616 (+)
JF1/MsJ	ENSUMUG00000038550	lncRNA gene	Chr8:86183813-86185634 (+)
LP/J	ENSMUSG00230030431	lncRNA gene	Chr8:87518832-87520646 (+)
NOD/ShiLtJ	ENSMUSG00190029950	lncRNA gene	Chr8:77857473-77859287 (+)
NZO/HlLtJ	ENSMUSG00225023146	lncRNA gene	Chr8:90883364-90885185 (+)
PWK/PhJ	ENSLUMG00010030498	lncRNA gene	Chr8:77567410-77569226 (+)
SPRET/EiJ	ENSMSPG00010024657	lncRNA gene	Chr8:79405655-79407471 (+)
WSB/EiJ	ENSIUOG00005016572	lncRNA gene	Chr8:78601901-78603715 (+)

Homology

• Gene Tree
  9530004M14Rik
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  32 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving 9530004M14Rik
• Find Mice (IMSR)
  0 strains or lines available

Expression

• cDNA Data
  1

• Other Mouse Links
  GEO

Sequences &
Gene Models

• All Sequences
  26

• Ensembl
  ENSMUSG00000119975 (Evidence)
• NCBI Gene
  77370

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000119975	Ensembl Gene Model | MGI Sequence Detail	2025	C57BL/6J
transcript	ENSMUST00000361256	Ensembl | MGI Sequence Detail	775	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 37

  Phenotypes 32
• Earliest
  J:13049 Gruneberg H, Genetical studies on the skeleton of the mouse. XVIII. Three genes for syndactylism. J Genet. 1956;54(1):113-145
• Latest
  J:348117 Okuma H, et al., N-terminal domain on dystroglycan enables LARGE1 to extend matriglycan on alpha-dystroglycan and prevents muscular dystrophy. Elife. 2023 Feb 1;12

TSS for 9530004M14Rik:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr78216	Chr8:83128557-83128603 (+)	51 bp