4930412E21Rik Gene Detail

Summary

• Symbol
  4930412E21Rik
• Name
  RIKEN cDNA 4930412E21 gene
• Synonyms
  Gm2305

• Feature Type
  lncRNA gene
• IDs
  MGI:1924114
  NCBI Gene: 100039548
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr3:23515247-23575565 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  2 experiments

Strain
Comparison

• SNPs within 2kb
  1992 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1924114	lncRNA gene	Chr3:23515196-23664763 (+)
129S1/SvImJ	ENSMUSG00200018347	lncRNA gene	Chr3:20235514-20295883 (+)
A/J	ENSMUSG00195022271	lncRNA gene	Chr3:20370838-20431197 (+)
AKR/J	ENSMUSG00220008838	lncRNA gene	Chr3:20358502-20418864 (+)
BALB/cJ	ENSMUSG00180034900	lncRNA gene	Chr3:20373587-20433948 (+)
C3H/HeJ	ENSMUSG00175028755	lncRNA gene	Chr3:20363831-20424182 (+)
C57BL/6NJ	ENSMUSG00215021544	lncRNA gene	Chr3:20604458-20664819 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0005584	lincRNA gene	Chr3:18920965-18969672 (+)
CAST/EiJ	ENSTCUG00005024835	lncRNA gene	Chr3:20163190-20232997 (+)
CBA/J	ENSMUSG00210037382	lncRNA gene	Chr3:20343900-20404252 (+)
DBA/2J	ENSMUSG00185009618	lncRNA gene	Chr3:20587181-20647540 (+)
FVB/NJ	ENSMUSG00205002633	lncRNA gene	Chr3:19887703-19951860 (+)
JF1/MsJ	ENSUMUG00000019736	lncRNA gene	Chr3:20116075-20187061 (+)
LP/J	ENSMUSG00230002086	lncRNA gene	Chr3:22462749-22523111 (+)
NOD/ShiLtJ	ENSMUSG00190037859	lncRNA gene	Chr3:20712534-20776682 (+)
NZO/HlLtJ	ENSMUSG00225007304	lncRNA gene	Chr3:25108897-25169253 (+)
PWK/PhJ	ENSLUMG00010003471	lncRNA gene	Chr3:20088398-20159010 (+)
SPRET/EiJ	ENSMSPG00010026196	lncRNA gene	Chr3:20369765-20414849 (+)
WSB/EiJ	ENSIUOG00005036203	lncRNA gene	Chr3:20542126-20610610 (+)

Homology

• Gene Tree
  4930412E21Rik
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Radiation induced
  1
• Genomic Mutations
  1 involving 4930412E21Rik
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  49
• RefSeq
  1

• Ensembl
  ENSMUSG00000102203 (Evidence)
• NCBI Gene
  100039548

Representative Sequences			Length	Strain/Species
genomic	100039548	NCBI Gene Model | MGI Sequence Detail	60319	C57BL/6J
transcript	AK015118	GenBank | ENA | DDBJ | MGI Sequence Detail	782	C57BL/6J

Molecular
Reagents

• All nucleic 1

  cDNA 1

Other
Accession IDs

MGI:3780476

References

• Summaries
  All 12

  Diseases 1

  Phenotypes 2
• Earliest
  J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
• Latest
  J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426

TSS for 4930412E21Rik:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr28593	Chr3:23515213-23515239 (+)	-21 bp