1700121L03Rik MGI Mouse Gene Detail - MGI:1923910

Sequence Map

Chr1:125118013-125125233 bp, - strand
From Ensembl annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1923910	lncRNA gene	Chr1:125118013-125125233 (-)
129S1/SvImJ	ENSMUSG00200009552	lncRNA gene	Chr1:122688218-122695387 (-)
A/J	ENSMUSG00195004677	lncRNA gene	Chr1:121791876-121799045 (-)
AKR/J	ENSMUSG00220025021	lncRNA gene	Chr1:121643746-121650917 (-)
BALB/cJ	ENSMUSG00180012845	lncRNA gene	Chr1:122351530-122358700 (-)
C3H/HeJ	ENSMUSG00175020246	lncRNA gene	Chr1:122073945-122081114 (-)
C57BL/6NJ	ENSMUSG00215013923	lncRNA gene	Chr1:122038735-122045908 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005006594	lncRNA gene	Chr1:120986135-120991972 (-)
CBA/J	ENSMUSG00210001442	lncRNA gene	Chr1:121918860-121926029 (-)
DBA/2J	ENSMUSG00185002162	lncRNA gene	Chr1:126307910-126315079 (-)
FVB/NJ	ENSMUSG00205012615	lncRNA gene	Chr1:121362924-121370102 (-)
JF1/MsJ	ENSUMUG00000002373	lncRNA gene	Chr1:125475214-125481050 (-)
LP/J	ENSMUSG00230001532	lncRNA gene	Chr1:125870846-125878015 (-)
NOD/ShiLtJ	ENSMUSG00190006920	lncRNA gene	Chr1:121915172-121922352 (-)
NZO/HlLtJ	ENSMUSG00225005215	lncRNA gene	Chr1:129613514-129620687 (-)
PWK/PhJ	ENSLUMG00010014807	lncRNA gene	Chr1:121071429-121077276 (-)
SPRET/EiJ	ENSMSPG00010045539	lncRNA gene	Chr1:123791598-123797409 (-)
WSB/EiJ	ENSIUOG00005003044	lncRNA gene	Chr1:121663638-121670812 (-)

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Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.

Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

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Representative Sequences				Length	Strain/Species	Flank
	genomic	ENSMUSG00000099574	Ensembl Gene Model \| MGI Sequence Detail	7221	C57BL/6J	± kb
	transcript	ENSMUST00000187796	Ensembl \| MGI Sequence Detail	751	Not Applicable

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Summaries

All 13

Phenotypes 4
Earliest

J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
Latest

J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573

TSS for 1700121L03Rik:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr13373	Chr1:125125188-125125226 (-)	26 bp

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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