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1700113A16Rik Gene Detail
Summary
  • Symbol
    1700113A16Rik
  • Name
    RIKEN cDNA 1700113A16 gene
  • Synonyms
    2210408E11Rik
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1923892
    NCBI Gene: 76642
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:88078867-88085092 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 3, 38.78 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    10 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1923892
 lncRNA gene Chr3:88078857-88085096 (-)
129S1/SvImJ MGP_129S1SvImJ_G0003771
 antisense lncRNA gene Chr3:88317250-88324660 (-)
A/J MGP_AJ_G0003751
 antisense lncRNA gene Chr3:85318418-85324846 (-)
AKR/J MGP_AKRJ_G0003728
 antisense lncRNA gene Chr3:87413616-87419552 (-)
BALB/cJ MGP_BALBcJ_G0003740
 antisense lncRNA gene Chr3:85412347-85418645 (-)
C3H/HeJ MGP_C3HHeJ_G0003687
 antisense lncRNA gene Chr3:87701388-87709494 (-)
C57BL/6NJ MGP_C57BL6NJ_G0003881
 antisense lncRNA gene Chr3:91564798-91574568 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0003385
 antisense lncRNA gene Chr3:80945195-80951162 (-)
CAST/EiJ MGP_CASTEiJ_G0003650
 antisense lncRNA gene Chr3:87906139-87912942 (-)
CBA/J MGP_CBAJ_G0003683
 antisense lncRNA gene Chr3:94681335-94694271 (-)
DBA/2J MGP_DBA2J_G0003692
 antisense lncRNA gene Chr3:84805507-84811805 (-)
FVB/NJ MGP_FVBNJ_G0003713
 antisense lncRNA gene Chr3:83082633-83088482 (-)
LP/J MGP_LPJ_G0003772
 antisense lncRNA gene Chr3:89284676-89292792 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0003701
 antisense lncRNA gene Chr3:100923845-100931414 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0003882
 antisense lncRNA gene Chr3:87174689-87183011 (-)
PWK/PhJ MGP_PWKPhJ_G0003607
 antisense lncRNA gene Chr3:84604190-84610714 (-)
SPRET/EiJ MGP_SPRETEiJ_G0003549
 antisense lncRNA gene Chr3:86352871-86358612 (-)
WSB/EiJ MGP_WSBEiJ_G0003686
 antisense lncRNA gene Chr3:87530737-87538474 (-)



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
  • All Mutations and Alleles
    17
  • Chemically induced (other)
    1
  • Gene trapped
    15
  • Radiation induced
    1
  • Genomic Mutations
    2 involving 1700113A16Rik
  • Find Mice (IMSR)
    0 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    3
Sequences &
Gene Models
less
  • All Sequences
    30
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 76642 NCBI Gene Model | MGI Sequence Detail 6226 C57BL/6J ±  kb
transcript NR_045997 RefSeq | MGI Sequence Detail 983 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3

    Microarray probesets 1
Other
Accession IDs
less
MGI:1917429, MGI:2139564
References
more
  • Summaries
    All 19
    Diseases 1
    Phenotypes 8
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory