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1700047N06Rik Gene Detail
Summary
  • Symbol
    1700047N06Rik
  • Name
    RIKEN cDNA 1700047N06 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1923853
    NCBI Gene: 76603
  • Alliance
    genome feature page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:10127250-10128169 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 1, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    130 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1923853
 lncRNA gene Chr1:10127250-10128169 (-)
129S1/SvImJ ENSMUSG00200002836
 unclassified gene Chr1:7451576-7452495 (-)
A/J ENSMUSG00195003201
 unclassified gene Chr1:7269317-7270236 (-)
AKR/J ENSMUSG00220004017
 unclassified gene Chr1:7369694-7370613 (-)
BALB/cJ ENSMUSG00180009516
 unclassified gene Chr1:7352878-7353797 (-)
C3H/HeJ ENSMUSG00175000349
 unclassified gene Chr1:7249143-7250062 (-)
C57BL/6NJ ENSMUSG00215004215
 unclassified gene Chr1:7311665-7312584 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0000183
 unclassified gene Chr1:6230993-6231933 (-)
CAST/EiJ ENSTCUG00005002097
 unclassified gene Chr1:7690054-7690978 (-)
CBA/J ENSMUSG00210001965
 unclassified gene Chr1:7108628-7109547 (-)
DBA/2J ENSMUSG00185004597
 unclassified gene Chr1:8197261-8198180 (-)
FVB/NJ ENSMUSG00205005545
 unclassified gene Chr1:7446701-7447620 (-)
JF1/MsJ ENSUMUG00000004730
 unclassified gene Chr1:7480614-7481535 (-)
LP/J ENSMUSG00230002589
 unclassified gene Chr1:8193274-8194193 (-)
NOD/ShiLtJ ENSMUSG00190001466
 unclassified gene Chr1:7261157-7262076 (-)
NZO/HlLtJ ENSMUSG00225005792
 unclassified gene Chr1:11595257-11596176 (-)
PWK/PhJ ENSLUMG00010002410
 unclassified gene Chr1:7085317-7086238 (-)
SPRET/EiJ ENSMSPG00010014414
 unclassified gene Chr1:7689872-7690782 (-)
WSB/EiJ ENSIUOG00005011714
 unclassified gene Chr1:7276057-7276976 (-)



Homology
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Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • cDNA Data
    1
Sequences &
Gene Models
less
  • All Sequences
    21
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000102356 Ensembl Gene Model | MGI Sequence Detail 920 C57BL/6J ±  kb
transcript AK006719 GenBank | ENA | DDBJ | MGI Sequence Detail 921 C57BL/6J  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1
References
more
  • Summaries
    All 6
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory