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Celf6 Gene Detail
Summary
  • Symbol
    Celf6
  • Name
    CUGBP, Elav-like family member 6
  • Synonyms
    6330569O16Rik, Brunol6
  • Feature Type
    protein coding gene
  • IDs
    MGI:1923433
    NCBI Gene: 76183
  • Alliance
    genome feature page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:59485200-59514575 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 9, 32.02 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    574 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1923433
 protein coding gene Chr9:59485200-59516316 (+)
129S1/SvImJ ENSMUSG00200034992
 protein coding gene Chr9:56604058-56633434 (+)
A/J ENSMUSG00195036645
 protein coding gene Chr9:56311225-56340602 (+)
AKR/J ENSMUSG00220024307
 protein coding gene Chr9:56460992-56490365 (+)
BALB/cJ ENSMUSG00180017206
 protein coding gene Chr9:56425982-56455359 (+)
C3H/HeJ ENSMUSG00175019116
 protein coding gene Chr9:56437873-56467254 (+)
C57BL/6NJ ENSMUSG00215018631
 protein coding gene Chr9:56419242-56448622 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0032305
 protein coding gene Chr9:56779086-56808646 (+)
CAST/EiJ ENSTCUG00005020359
 protein coding gene Chr9:56354160-56383697 (+)
CBA/J ENSMUSG00210035963
 protein coding gene Chr9:56542642-56572131 (+)
DBA/2J ENSMUSG00185039079
 protein coding gene Chr9:56564657-56594035 (+)
FVB/NJ ENSMUSG00205029968
 protein coding gene Chr9:56880483-56909857 (+)
JF1/MsJ ENSUMUG00000038923
 protein coding gene Chr9:56583371-56612615 (+)
LP/J ENSMUSG00230037692
 protein coding gene Chr9:56803640-56833013 (+)
NOD/ShiLtJ ENSMUSG00190036929
 protein coding gene Chr9:56634795-56664167 (+)
NZO/HlLtJ ENSMUSG00225027159
 protein coding gene Chr9:56852433-56882079 (+)
PWK/PhJ ENSLUMG00010030257
 protein coding gene Chr9:56538176-56567523 (+)
SPRET/EiJ ENSMSPG00010021088
 protein coding gene Chr9:57584563-57611840 (+)
WSB/EiJ ENSIUOG00005038547
 protein coding gene Chr9:56042191-56071828 (+)



Homology
more
  • Human Ortholog
    CELF6, CUGBP Elav-like family member 6
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CELF6, CUGBP Elav-like family member 6
  • Synonyms
    BRUNOL6
  • Links
    NCBI Gene ID: 60677
    UniProt: Q96J87

  • Chr Location
    15q23; chr15:72284727-72320448 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    10 phenotypes from 2 alleles in 1 genetic background
    14 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Mice homozygous for a knock-out allele exhibit decreased ultrasonic vocalization, decreased brain serotonin levels, and selective behavioral deficits including an abnormal response to novel odor.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    16
  • GO References
    7
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    644
  • Tissues
    43
  • cDNA Data
    11
  • Literature Summary
    7
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000032297 Ensembl Gene Model | MGI Sequence Detail 29376 C57BL/6J ±  kb
transcript ENSMUST00000118549 Ensembl | MGI Sequence Detail 2973 Not Applicable  
polypeptide ENSMUSP00000112755 Ensembl | MGI Sequence Detail 481 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 15
    cDNA 11
    Primer pair 3
    Other 1

    Microarray probesets 2
References
more
  • Summaries
    All 45
    Developmental Gene Expression 7
    Gene Ontology 7
    Phenotypes 14
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory