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Ccdc162 Gene Detail
Summary
  • Symbol
    Ccdc162
  • Name
    coiled-coil domain containing 162
  • Synonyms
    5033413D22Rik, Gm29096, Gm6976
  • Feature Type
    protein coding gene
  • IDs
    MGI:1923223
    NCBI Gene: 75973
  • Alliance
    genome feature page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr10:41414838-41592586 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 10, 22.48 cM, cytoband B2
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    4960 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1923223
 protein coding gene Chr10:41414838-41592630 (-)
129S1/SvImJ ENSMUSG00200008406
 protein coding gene Chr10:38285902-38441639 (-)
A/J ENSMUSG00195014882
 protein coding gene Chr10:38576335-38732013 (-)
AKR/J ENSMUSG00220025816
 protein coding gene Chr10:38252841-38408501 (-)
BALB/cJ ENSMUSG00180016059
 protein coding gene Chr10:38661454-38817118 (-)
C3H/HeJ ENSMUSG00175010957
 protein coding gene Chr10:38455724-38611382 (-)
C57BL/6NJ ENSMUSG00215006393
 protein coding gene Chr10:38205052-38360718 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0015271
 protein coding gene Chr10:37000737-37172092 (-)
CAST/EiJ ENSTCUG00005027542
 protein coding gene Chr10:38651917-38815028 (-)
CBA/J ENSMUSG00210025247
 protein coding gene Chr10:38349191-38504857 (-)
DBA/2J ENSMUSG00185006452
 protein coding gene Chr10:38501849-38657504 (-)
FVB/NJ ENSMUSG00205010816
 protein coding gene Chr10:38416997-38572675 (-)
JF1/MsJ ENSUMUG00000025000
 protein coding gene Chr10:38278615-38437398 (-)
LP/J ENSMUSG00230005117
 protein coding gene Chr10:40275757-40431489 (-)
NOD/ShiLtJ ENSMUSG00190025294
 protein coding gene Chr10:38630027-38785655 (-)
NZO/HlLtJ ENSMUSG00225016289
 protein coding gene Chr10:44594841-44750492 (-)
PWK/PhJ ENSLUMG00010007474
 protein coding gene Chr10:38406889-38563255 (-)
SPRET/EiJ ENSMSPG00010020175
 protein coding gene Chr10:39439627-39621707 (-)
WSB/EiJ ENSIUOG00005015003
 protein coding gene Chr10:38187632-38343446 (-)



Homology
more
  • Human Ortholog
    CCDC162P, coiled-coil domain containing 162, pseudogene
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CCDC162P, coiled-coil domain containing 162, pseudogene
  • Synonyms
    C6orf183, C6orf184, C6orf185, CCDC162
  • Links
    NCBI Gene ID: 221262

  • Chr Location
    6q21; chr6:109165831-109355046 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    10 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • cDNA Data
    10
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 75973 NCBI Gene Model | MGI Sequence Detail 177749 C57BL/6J ±  kb
transcript NM_001358562 RefSeq | MGI Sequence Detail 7094 C57BL/6  
polypeptide Q0VG85 UniProt | EBI | MGI Sequence Detail 912 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    4 Sequences
  • InterPro Domains
    IPR063719 CCDC162, C-terminal region
    IPR060517 CCDC162, middle domain
    IPR063720 CCDC162, N-terminal domain
    IPR040401 Coiled-coil domain-containing protein 162
    IPR029376 Domain of unknown function DUF4549
Molecular
Reagents
less
  • All nucleic 10
    cDNA 10

    Microarray probesets 2
Other
Accession IDs
less
MGI:3644617, MGI:5579802
References
more
  • Summaries
    All 31
    Phenotypes 10
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory