4930594O21Rik Gene Detail

Summary

• Symbol
  4930594O21Rik
• Name
  RIKEN cDNA 4930594O21 gene

• Feature Type
  lncRNA gene
• IDs
  MGI:1923197
  NCBI Gene: 75947
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr3:37664040-37669425 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, 18.46 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  267 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1923197	lncRNA gene	Chr3:37656645-37670875 (+)
129S1/SvImJ	ENSMUSG00200006953	lncRNA gene	Chr3:34413874-34415238 (+)
A/J	ENSMUSG00195001536	lncRNA gene	Chr3:34377059-34378425 (+)
AKR/J	ENSMUSG00220000644	lncRNA gene	Chr3:34443841-34445205 (+)
BALB/cJ	ENSMUSG00180002715	lncRNA gene	Chr3:34523159-34524522 (+)
C3H/HeJ	ENSMUSG00175003511	lncRNA gene	Chr3:34409480-34410846 (+)
C57BL/6NJ	ENSMUSG00215001520	lncRNA gene	Chr3:34797180-34798543 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0005603	lincRNA gene	Chr3:32439966-32441318 (+)
CAST/EiJ	ENSTCUG00005001092	lncRNA gene	Chr3:34257924-34259288 (+)
CBA/J	ENSMUSG00210001619	lncRNA gene	Chr3:34464582-34465948 (+)
DBA/2J	ENSMUSG00185001475	lncRNA gene	Chr3:34669874-34671238 (+)
FVB/NJ	ENSMUSG00205000721	lncRNA gene	Chr3:33841463-33842826 (+)
JF1/MsJ	ENSUMUG00000001054	lncRNA gene	Chr3:34210138-34211501 (+)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190001626	lncRNA gene	Chr3:34711596-34712960 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010000816	lncRNA gene	Chr3:34254715-34256078 (+)
SPRET/EiJ	ENSMSPG00010000800	lncRNA gene	Chr3:34649376-34650722 (+)
WSB/EiJ	ENSIUOG00005013654	lncRNA gene	Chr3:34712373-34713739 (+)

Homology

• Gene Tree
  4930594O21Rik
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  7 phenotype references
  

• All Mutations and Alleles
  2
• Radiation induced
  2
• Genomic Mutations
  2 involving 4930594O21Rik
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  2

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  41
• RefSeq
  3

• Ensembl
  ENSMUSG00000085677 (Evidence)
• NCBI Gene
  75947

Representative Sequences			Length	Strain/Species
genomic	75947	NCBI Gene Model | MGI Sequence Detail	5386	C57BL/6J
transcript	NR_130161	RefSeq | MGI Sequence Detail	1089	C57BL/6

Molecular
Reagents

• All nucleic 2

  cDNA 2

References

• Summaries
  All 15

  Diseases 1

  Phenotypes 7
• Earliest
  J:64276 Lyon MF, et al., Dose-response curves for radiation-induced gene mutations in mouse oocytes and their interpretation. Mutat Res. 1979 Nov;63(1):161-73
• Latest
  J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426

TSS for 4930594O21Rik:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr28907	Chr3:37668060-37668076 (+)	4,028 bp