4930572G02Rik Gene Detail

Summary

• Symbol
  4930572G02Rik
• Name
  RIKEN cDNA 4930572G02 gene

• Feature Type
  lncRNA gene
• IDs
  MGI:1923193
  NCBI Gene: 75943
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr14:48798251-48807636 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, cytoband C1
• Mapping Data
  2 experiments

Strain
Comparison

• SNPs within 2kb
  410 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1923193	lncRNA gene	Chr14:48775448-48809345 (+)
129S1/SvImJ	ENSMUSG00200017310	lncRNA gene	Chr14:37613291-37647354 (+)
A/J	ENSMUSG00195025661	lncRNA gene	Chr14:37819388-37853456 (+)
AKR/J	ENSMUSG00220040798	lncRNA gene	Chr14:37193755-37227825 (+)
BALB/cJ	ENSMUSG00180047971	lncRNA gene	Chr14:37427636-37461709 (+)
C3H/HeJ	ENSMUSG00175029207	lncRNA gene	Chr14:39108007-39142072 (+)
C57BL/6NJ	ENSMUSG00215039573	lncRNA gene	Chr14:37796816-37830718 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005011009	lncRNA gene	Chr14:39600184-39633693 (+)
CBA/J	ENSMUSG00210043425	lncRNA gene	Chr14:37753166-37787224 (+)
DBA/2J	ENSMUSG00185056341	lncRNA gene	Chr14:42527041-42561103 (+)
FVB/NJ	ENSMUSG00205047152	lncRNA gene	Chr14:36955978-36990075 (+)
JF1/MsJ	ENSUMUG00000053993	lncRNA gene	Chr14:54572634-54606550 (+)
LP/J	ENSMUSG00230053201	lncRNA gene	Chr14:54781267-54815166 (+)
NOD/ShiLtJ	ENSMUSG00190047739	lncRNA gene	Chr14:37430185-37464284 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010040935	lncRNA gene	Chr14:37025856-37059870 (+)
SPRET/EiJ	ENSMSPG00010003331	lncRNA gene	Chr14:40377691-40411778 (+)
WSB/EiJ	ENSIUOG00005040555	lncRNA gene	Chr14:37321301-37355720 (+)

Homology

• Gene Tree
  4930572G02Rik
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving 4930572G02Rik
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  62
• RefSeq
  3

• Ensembl
  ENSMUSG00000115725 (Evidence)
• NCBI Gene
  75943

Representative Sequences			Length	Strain/Species
genomic	75943	NCBI Gene Model | MGI Sequence Detail	9386	C57BL/6J
transcript	KY467697	GenBank | ENA | DDBJ | MGI Sequence Detail	1616	ZRU/MplStud

Molecular
Reagents

• All nucleic 1

  cDNA 1

  
  

  Microarray probesets 1

References

• Summaries
  All 10

  Phenotypes 2
• Earliest
  J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
• Latest
  J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573