4930590H14Rik Gene Detail

Summary

• Symbol
  4930590H14Rik
• Name
  RIKEN cDNA 4930590H14 gene

• Feature Type
  lncRNA gene
• IDs
  MGI:1923182
  NCBI Gene: 75932
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr9:77264634-77265184 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  158 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1923182	lncRNA gene	Chr9:77264634-77265184 (+)
129S1/SvImJ	ENSMUSG00200020061	unclassified gene	Chr9:74403471-74404021 (+)
A/J	ENSMUSG00195011516	unclassified gene	Chr9:74163578-74164128 (+)
AKR/J	ENSMUSG00220015590	unclassified gene	Chr9:74296321-74296871 (+)
BALB/cJ	ENSMUSG00180021272	unclassified gene	Chr9:74277094-74277644 (+)
C3H/HeJ	ENSMUSG00175012515	unclassified gene	Chr9:74309589-74310139 (+)
C57BL/6NJ	ENSMUSG00215021104	unclassified gene	Chr9:74223456-74224006 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002030	unclassified gene	Chr9:74333153-74333707 (+)
CAST/EiJ	ENSTCUG00005010162	unclassified gene	Chr9:73970976-73971515 (+)
CBA/J	ENSMUSG00210013517	unclassified gene	Chr9:74362543-74363093 (+)
DBA/2J	ENSMUSG00185008223	unclassified gene	Chr9:74397864-74398414 (+)
FVB/NJ	ENSMUSG00205031893	unclassified gene	Chr9:74665927-74666477 (+)
JF1/MsJ	ENSUMUG00000040899	unclassified gene	Chr9:74362068-74362618 (+)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190037988	unclassified gene	Chr9:74499756-74500306 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010016459	unclassified gene	Chr9:74297868-74298418 (+)
SPRET/EiJ	ENSMSPG00010004276	unclassified gene	Chr9:75527196-75527749 (+)
WSB/EiJ	ENSIUOG00005027618	unclassified gene	Chr9:73835099-73835649 (+)

Homology

• Gene Tree
  4930590H14Rik
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  1
• Radiation induced
  1
• Genomic Mutations
  1 involving 4930590H14Rik
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000103794 (Evidence)
• NCBI Gene
  75932

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000103794	Ensembl Gene Model | MGI Sequence Detail	551	C57BL/6J
transcript	AK016379	GenBank | ENA | DDBJ | MGI Sequence Detail	551	C57BL/6J

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 11

  Phenotypes 5
• Earliest
  J:12013 Russell LB, Definition of functional units in a small chromosomal segment of the mouse and its use in interpreting the nature of radiation-induced mutations. Mutat Res. 1971 Jan;11(1):107-23
• Latest
  J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573