4930591E09Rik Gene Detail

Summary

• Symbol
  4930591E09Rik
• Name
  RIKEN cDNA 4930591E09 gene

• Feature Type
  lncRNA gene
• IDs
  MGI:1923127
  NCBI Gene: 75877
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:38051770-38057899 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  308 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1923127	lncRNA gene	Chr10:38051764-38057902 (+)
129S1/SvImJ	ENSMUSG00200009140	lncRNA gene	Chr10:34898437-34904560 (+)
A/J	ENSMUSG00195019413	lncRNA gene	Chr10:35206711-35212834 (+)
AKR/J	ENSMUSG00220030609	lncRNA gene	Chr10:34885108-34891231 (+)
BALB/cJ	ENSMUSG00180017826	lncRNA gene	Chr10:35294765-35300888 (+)
C3H/HeJ	ENSMUSG00175012332	lncRNA gene	Chr10:35082443-35088566 (+)
C57BL/6NJ	ENSMUSG00215010613	lncRNA gene	Chr10:34843283-34849406 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005029659	lncRNA gene	Chr10:35287318-35290568 (+)
CBA/J	ENSMUSG00210026292	lncRNA gene	Chr10:34982648-34988771 (+)
DBA/2J	ENSMUSG00185008259	lncRNA gene	Chr10:35135163-35141286 (+)
FVB/NJ	ENSMUSG00205013756	lncRNA gene	Chr10:35081277-35087400 (+)
JF1/MsJ	ENSUMUG00000037264	lncRNA gene	Chr10:34903108-34909232 (+)
LP/J	ENSMUSG00230016164	lncRNA gene	Chr10:36895845-36901968 (+)
NOD/ShiLtJ	ENSMUSG00190036240	lncRNA gene	Chr10:35265001-35271122 (+)
NZO/HlLtJ	ENSMUSG00225018434	lncRNA gene	Chr10:41191841-41201294 (+)
PWK/PhJ	ENSLUMG00010008104	lncRNA gene	Chr10:35003754-35009878 (+)
SPRET/EiJ	ENSMSPG00010022230	lncRNA gene	Chr10:36037211-36045186 (+)
WSB/EiJ	ENSIUOG00005015369	lncRNA gene	Chr10:34771691-34781132 (+)

Homology

• Gene Tree
  4930591E09Rik
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  6 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving 4930591E09Rik
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  1

• Ensembl
  ENSMUSG00000111234 (Evidence)
• NCBI Gene
  75877

Representative Sequences			Length	Strain/Species
genomic	75877	NCBI Gene Model | MGI Sequence Detail	6130	C57BL/6J
transcript	NR_131035	RefSeq | MGI Sequence Detail	486	ZRU/MplStud

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 13

  Phenotypes 6
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
• Latest
  J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573