4930580E04Rik MGI Mouse Gene Detail - MGI:1923106

Sequence Map

Chr5:23591891-23601629 bp, + strand
From Ensembl annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1923106	lncRNA gene	Chr5:23591891-23601629 (+)
129S1/SvImJ	ENSMUSG00200011911	lncRNA gene	Chr5:19214664-19216192 (+)
A/J	ENSMUSG00195041312	lncRNA gene	Chr5:18669371-18670863 (+)
AKR/J	ENSMUSG00220037749	lncRNA gene	Chr5:18764038-18765566 (+)
BALB/cJ	ENSMUSG00180025377	lncRNA gene	Chr5:18547567-18549095 (+)
C3H/HeJ	ENSMUSG00175027641	lncRNA gene	Chr5:20467609-20469101 (+)
C57BL/6NJ	ENSMUSG00215029914	lncRNA gene	Chr5:19103233-19104725 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0005990	lincRNA gene	Chr5:18316672-18318172 (+)
CAST/EiJ	ENSTCUG00005003519	lncRNA gene	Chr5:18689000-18690476 (+)
CBA/J	ENSMUSG00210005474	lncRNA gene	Chr5:19507190-19508682 (+)
DBA/2J	ENSMUSG00185038481	lncRNA gene	Chr5:21058050-21059578 (+)
FVB/NJ	ENSMUSG00205037071	lncRNA gene	Chr5:18281003-18282531 (+)
JF1/MsJ	ENSUMUG00000006811	lncRNA gene	Chr5:25602522-25604014 (+)
LP/J	ENSMUSG00230027055	lncRNA gene	Chr5:25496854-25498382 (+)
NOD/ShiLtJ	ENSMUSG00190005309	lncRNA gene	Chr5:18585609-18587137 (+)
NZO/HlLtJ	ENSMUSG00225022001	lncRNA gene	Chr5:30894519-30896047 (+)
PWK/PhJ	ENSLUMG00010036134	lncRNA gene	Chr5:18658557-18660042 (+)
SPRET/EiJ	ENSMSPG00010031697	lncRNA gene	Chr5:19521701-19523179 (+)
WSB/EiJ	ENSIUOG00005044093	lncRNA gene	Chr5:21400273-21401801 (+)

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Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.

Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

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Representative Sequences				Length	Strain/Species	Flank
	genomic	ENSMUSG00000106269	Ensembl Gene Model \| MGI Sequence Detail	9739	C57BL/6J	± kb
	transcript	ENSMUST00000197377	Ensembl \| MGI Sequence Detail	917	Not Applicable

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Summaries

All 12

Phenotypes 5
Earliest

J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
Latest

J:269071 Wong JC, et al., Functional evidence implicating chromosome 7q22 haploinsufficiency in myelodysplastic syndrome pathogenesis. Elife. 2015 Jul 20;4

TSS for 4930580E04Rik:

(View these features in JBrowse)

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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