Iqcd MGI Mouse Gene Detail - MGI:1922982

Symbol

Iqcd
Name

IQ motif containing D
Synonyms

4933433C09Rik

Feature Type

protein coding gene
IDs

MGI:1922982
NCBI Gene: 75732
Alliance

gene page
Transcription Start Sites

3 TSS

Sequence Map

Chr5:120727081-120745183 bp, + strand
From Ensembl annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

Genetic Map

Chromosome 5, 60.63 cM
Mapping Data

3 experiments

SNPs within 2kb

9 from dbSNP Build 142
Strain Annotations

18

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1922982	protein coding gene	Chr5:120724829-120745185 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0030007	protein coding gene	Chr5:123971692-123992084 (+)
A/J	MGP_AJ_G0029971	protein coding gene	Chr5:118834712-118852689 (+)
AKR/J	MGP_AKRJ_G0029910	protein coding gene	Chr5:122670245-122688401 (+)
BALB/cJ	MGP_BALBcJ_G0029982	protein coding gene	Chr5:120252137-120270341 (+)
C3H/HeJ	MGP_C3HHeJ_G0029702	protein coding gene	Chr5:123206486-123224376 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0030437	protein coding gene	Chr5:128625576-128646942 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0027663	protein coding gene	Chr5:113544596-113563016 (+)
CAST/EiJ	MGP_CASTEiJ_G0029111	protein coding gene	Chr5:122331798-122351814 (+)
CBA/J	MGP_CBAJ_G0029670	protein coding gene	Chr5:133615686-133640501 (+)
DBA/2J	MGP_DBA2J_G0029820	protein coding gene	Chr5:118919396-118938825 (+)
FVB/NJ	MGP_FVBNJ_G0029776	protein coding gene	Chr5:117844844-117865536 (+)
LP/J	MGP_LPJ_G0029908	protein coding gene	Chr5:124422561-124446580 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0029807	protein coding gene	Chr5:137580492-137605133 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0030478	protein coding gene	Chr5:122248771-122268534 (+)
PWK/PhJ	MGP_PWKPhJ_G0028824	protein coding gene	Chr5:117680644-117699766 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0028663	protein coding gene	Chr5:119907878-119929122 (+)
WSB/EiJ	MGP_WSBEiJ_G0029186	protein coding gene	Chr5:122841935-122862004 (+)

Human Ortholog

IQCD, IQ motif containing D

Vertebrate Orthologs

3

Vertebrate Orthology Source

Alliance of Genome Resources

Human Ortholog

IQCD, IQ motif containing D
Synonyms

4933433C09Rik, CFAP84, DRC10
Links

HGNC:25168

NCBI Gene ID: 115811

neXtProt AC: NX_Q96DY2

UniProt: Q96DY2
Chr Location

12q24.13; chr12:113195441-113221094 (-) GRCh38

MGI Vertebrate Homology

Iqcd stringent orthology
1 human;1 mouse;1 rat;1 zebrafish
HCOP

vertebrate homology predictions: IQCD
Gene Tree

Iqcd

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Phenotype Summary

11 phenotype references

All Mutations and Alleles

8
Chemically induced (other)

1
Gene trapped

2
Radiation induced

1
Targeted

4
Genomic Mutations

2 involving Iqcd
Find Mice (IMSR)

21 strains or lines available

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All GO Annotations

3
GO References

2

Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.

Cellular Component

cell projection	cytoplasmic vesicle	cytoskeleton	cytosol	endoplasmic reticulum	endosome	extracellular region	Golgi apparatus	mitochondrion	non-membrane-bounded organelle	nucleus	organelle envelope	organelle lumen	plasma membrane	protein-containing complex	synapse	vacuole

Click cells to view annotations.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

Assay Results

706
cDNA Data

10

Tissue x Stage Matrix

Other Mouse Links

Allen Institute

GEO

Expression Atlas
Other Vertebrate Links

Xenbase iqcd

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All Sequences

36
RefSeq

4
UniProt

2
CCDS

CCDS19621.1

Ensembl

ENSMUSG00000029601 (Evidence)
NCBI Gene

75732

			Length	Strain/Species	Flank
genomic	ENSMUSG00000029601	Ensembl Gene Model \| MGI Sequence Detail	18103	C57BL/6J	± kb
transcript	ENSMUST00000094391	Ensembl \| MGI Sequence Detail	1673	Not Applicable
polypeptide	ENSMUSP00000091955	Ensembl \| MGI Sequence Detail	458	Not Applicable

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UniProt

2 Sequences
Protein Ontology

PR:000030945 dynein regulatory complex protein 10

(term hierarchy)
InterPro Domains

IPR042815 Dynein regulatory complex protein 10

IPR000048 IQ motif, EF-hand binding site

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All nucleic 18

Genomic 8

cDNA 10

Microarray probesets 2

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MGI:2140954

Summaries

All 33

Gene Ontology 2

Phenotypes 11
Earliest

J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
Latest

J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

TSS for Iqcd:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr48516	Chr5:120725780-120725807 (+)	-1,287 bp
Tssr48517	Chr5:120727068-120727084 (+)	-5 bp
Tssr48518	Chr5:120727085-120727126 (+)	25 bp

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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