1810049I09Rik Gene Detail

Summary

• Symbol
  1810049I09Rik
• Name
  RIKEN cDNA 1810049I09 gene
• Synonyms
  Gm45214

• Feature Type
  lncRNA gene
• IDs
  MGI:1922851
  NCBI Gene: 75601
• Alliance
  genome feature page
• Transcription Start Sites
  3 TSS

Location &
Maps

• Sequence Map
  Chr7:64862562-64863168 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic
• Mapping Data
  2 experiments

Strain
Comparison

• SNPs within 2kb
  166 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1922851	lncRNA gene	Chr7:64852302-64863629 (-)
129S1/SvImJ	ENSMUSG00200012164	lncRNA gene	Chr7:51571257-51571872 (-)
A/J	ENSMUSG00195013784	lncRNA gene	Chr7:55999574-56000189 (-)
AKR/J	ENSMUSG00220011544	lncRNA gene	Chr7:49501710-49502325 (-)
BALB/cJ	ENSMUSG00180005089	lncRNA gene	Chr7:52711727-52712342 (-)
C3H/HeJ	ENSMUSG00175011662	lncRNA gene	Chr7:53503515-53504130 (-)
C57BL/6NJ	ENSMUSG00215019418	lncRNA gene	Chr7:52636778-52637393 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0006536	lincRNA gene	Chr7:67967917-67968530 (-)
CAST/EiJ	ENSTCUG00005012299	lncRNA gene	Chr7:56182738-56183353 (-)
CBA/J	ENSMUSG00210019935	lncRNA gene	Chr7:53342010-53342625 (-)
DBA/2J	ENSMUSG00185006338	lncRNA gene	Chr7:57677021-57677636 (-)
FVB/NJ	ENSMUSG00205004445	lncRNA gene	Chr7:53345911-53346526 (-)
JF1/MsJ	ENSUMUG00000012868	lncRNA gene	Chr7:62423144-62423759 (-)
LP/J	ENSMUSG00230020829	lncRNA gene	Chr7:63765749-63766364 (-)
NOD/ShiLtJ	ENSMUSG00190007332	lncRNA gene	Chr7:53450297-53450912 (-)
NZO/HlLtJ	ENSMUSG00225016595	lncRNA gene	Chr7:62049941-62050556 (-)
PWK/PhJ	ENSLUMG00010018826	lncRNA gene	Chr7:51970724-51971339 (-)
SPRET/EiJ	ENSMSPG00010003685	lncRNA gene	Chr7:52341959-52342573 (-)
WSB/EiJ	ENSIUOG00005005182	lncRNA gene	Chr7:53882098-53882713 (-)

Homology

• Gene Tree
  1810049I09Rik
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  9 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving 1810049I09Rik
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  4
• Literature Summary
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  31
• RefSeq
  1

• Ensembl
  ENSMUSG00000108587 (Evidence)
• NCBI Gene
  75601

Representative Sequences			Length	Strain/Species
genomic	75601	NCBI Gene Model | MGI Sequence Detail	607	C57BL/6J
transcript	NR_166507	RefSeq | MGI Sequence Detail	447	ZRU/MplStud

Molecular
Reagents

• All nucleic 4

  cDNA 4

Other
Accession IDs

MGI:5753790

References

• Summaries
  All 21

  Developmental Gene Expression 1

  Phenotypes 9
• Earliest
  J:88307 Giometti CS, et al., The analysis of recessive lethal mutations in mice by using two-dimensional gel electrophoresis of liver proteins. Mutat Res. 1990 Sep;242(1):47-55
• Latest
  J:374041 Verma A, et al., Parental noncoding RNA expression dynamics across sperm, oocyte, and zygote. NAR Genom Bioinform. 2025 Dec;7(4):lqaf136

TSS for 1810049I09Rik:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr72799	Chr7:64863192-64863197 (-)	-27 bp
Tssr72798	Chr7:64863145-64863190 (-)	0 bp
Tssr72797	Chr7:64863112-64863121 (-)	51 bp