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Cfap97d1 Gene Detail
Summary
  • Symbol
    Cfap97d1
  • Name
    CFAP97 domain containing 1
  • Synonyms
    1700006E09Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1922687
    NCBI Gene: 75437
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:101877882-101883090 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 65.48 cM, cytoband D
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    21 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1922687
 protein coding gene Chr11:101875105-101883090 (+)
129S1/SvImJ MGP_129S1SvImJ_G0019216
 protein coding gene Chr11:104925662-104933620 (+)
A/J MGP_AJ_G0019184
 protein coding gene Chr11:100495252-100503245 (+)
AKR/J MGP_AKRJ_G0019153
 protein coding gene Chr11:103609472-103617429 (+)
BALB/cJ MGP_BALBcJ_G0019158
 protein coding gene Chr11:100979591-100987549 (+)
C3H/HeJ MGP_C3HHeJ_G0018967
 protein coding gene Chr11:103813057-103821015 (+)
C57BL/6NJ MGP_C57BL6NJ_G0019607
 protein coding gene Chr11:108197971-108205956 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0017233
 protein coding gene Chr11:97919430-97927502 (+)
CAST/EiJ MGP_CASTEiJ_G0018521
 protein coding gene Chr11:104777661-104785630 (+)
CBA/J MGP_CBAJ_G0018936
 protein coding gene Chr11:112662633-112670618 (+)
DBA/2J MGP_DBA2J_G0019048
 protein coding gene Chr11:100020658-100028791 (+)
FVB/NJ MGP_FVBNJ_G0019038
 protein coding gene Chr11:99547029-99555014 (+)
LP/J MGP_LPJ_G0019117
 protein coding gene Chr11:105442457-105450415 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0019069
 protein coding gene Chr11:112191601-112199559 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0019645
 protein coding gene Chr11:103969460-103977428 (+)
PWK/PhJ MGP_PWKPhJ_G0018284
 protein coding gene Chr11:101080602-101088813 (+)
SPRET/EiJ MGP_SPRETEiJ_G0018076
 protein coding gene Chr11:103717036-103724998 (+)
WSB/EiJ MGP_WSBEiJ_G0018570
 protein coding gene Chr11:103954655-103962654 (+)



Homology
more
  • Human Ortholog
    CFAP97D1, CFAP97 domain containing 1
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CFAP97D1, CFAP97 domain containing 1
  • Synonyms
    C17orf105
  • Links
    NCBI Gene ID: 284067
    neXtProt AC: NX_B2RV13
    UniProt: B2RV13

  • Chr Location
    17q21.31; chr17:43780435-43787620 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotypes from 3 alleles in 3 genetic backgrounds
    11 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Mice homozygous for a null allele exhibit reduced male fertility associated with impaired sperm penetration of zona pellucida, asthenozoospermia, and abnormal axoneme structure.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    2
  • GO References
    2
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    10
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 75437 NCBI Gene Model | MGI Sequence Detail 5209 C57BL/6J ±  kb
    transcript NM_029287 RefSeq | MGI Sequence Detail 698 C57BL/6  
    polypeptide Q9DAN9 UniProt | EBI | MGI Sequence Detail 164 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 10
      cDNA 10

      Microarray probesets 2
    References
    more
    • Summaries
      All 29
      Gene Ontology 2
      Phenotypes 11
    • Earliest
      J:56548 Zheng B, et al., Engineering a mouse balancer chromosome. Nat Genet. 1999 Aug;22(4):375-8
    • Latest
      J:294173 Oura S, et al., Cfap97d1 is important for flagellar axoneme maintenance and male mouse fertility. PLoS Genet. 2020 Aug;16(8):e1008954
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    04/16/2024
    MGI 6.23     		The Jackson Laboratory