About   Help   FAQ
Hoxb5os Gene Detail
Summary
  • Symbol
    Hoxb5os
  • Name
    homeobox B5 and homeobox B6, opposite strand
  • Synonyms
    0610040B09Rik, Hoxb5/6as
Location &
Maps
more
  • Sequence Map
    Chr11:96181863-96197736 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 59.82 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    64 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1922645
 antisense lncRNA gene Chr11:96181849-96197736 (-)
129S1/SvImJ MGP_129S1SvImJ_G0003044
 antisense lncRNA gene Chr11:98602838-98618617 (-)
A/J MGP_AJ_G0003021
 antisense lncRNA gene Chr11:94575680-94591507 (-)
AKR/J MGP_AKRJ_G0003002
 antisense lncRNA gene Chr11:97501583-97517674 (-)
BALB/cJ MGP_BALBcJ_G0003008
 antisense lncRNA gene Chr11:95075356-95091194 (-)
C3H/HeJ MGP_C3HHeJ_G0002964
 antisense lncRNA gene Chr11:97633423-97648907 (-)
C57BL/6NJ MGP_C57BL6NJ_G0003150
 antisense lncRNA gene Chr11:101685379-101701175 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0002689
 antisense lncRNA gene Chr11:92062241-92078065 (-)
CAST/EiJ MGP_CASTEiJ_G0002934
 antisense lncRNA gene Chr11:98455050-98472551 (-)
CBA/J MGP_CBAJ_G0002961
 antisense lncRNA gene Chr11:105846863-105862978 (-)
DBA/2J MGP_DBA2J_G0002967
 antisense lncRNA gene Chr11:94142788-94158943 (-)
FVB/NJ MGP_FVBNJ_G0002986
 antisense lncRNA gene Chr11:93621786-93637676 (-)
LP/J MGP_LPJ_G0003043
 antisense lncRNA gene Chr11:99140306-99156114 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0002974
 antisense lncRNA gene Chr11:105842938-105858651 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0003154
 antisense lncRNA gene Chr11:97809216-97825131 (-)
PWK/PhJ MGP_PWKPhJ_G0002893
 antisense lncRNA gene Chr11:95094235-95110303 (-)
SPRET/EiJ MGP_SPRETEiJ_G0002838
 antisense lncRNA gene Chr11:97535004-97551601 (-)
WSB/EiJ MGP_WSBEiJ_G0002964
 antisense lncRNA gene Chr11:97694657-97711412 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    14 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    3
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    730
  • Tissues
    15
  • cDNA Data
    3
  • Literature Summary
    3
Sequences &
Gene Models
less
  • All Sequences
    26
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 75395 NCBI Gene Model | MGI Sequence Detail 15874 C57BL/6J ±  kb
transcript NR_131758 RefSeq | MGI Sequence Detail 583 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3

    Microarray probesets 2
Other
Accession IDs
less
MGI:3510990
References
more
  • Summaries
    All 28
    Developmental Gene Expression 3
    Gene Ontology 1
    Phenotypes 14
  • Earliest
    J:56548 Zheng B, et al., Engineering a mouse balancer chromosome. Nat Genet. 1999 Aug;22(4):375-8
  • Latest
    J:329266 Chen CH, et al., Transgenic human HOXB1-9 directs anterior-posterior axial skeleton pattern in Hoxb1-9 deficient mice. Differentiation. 2022 Sep-Oct;127:1-11
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory