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4930547M16Rik Gene Detail
Summary
  • Symbol
    4930547M16Rik
  • Name
    RIKEN cDNA 4930547M16 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1922549
    NCBI Gene: 75299
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr10:39775312-39783934 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 10, 21.28 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    21 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1922549
 lncRNA gene Chr10:39775312-39783934 (+)
129S1/SvImJ MGP_129S1SvImJ_G0005114
 lincRNA gene Chr10:38430354-38442126 (+)
A/J MGP_AJ_G0005097
 lincRNA gene Chr10:37397203-37406890 (+)
AKR/J MGP_AKRJ_G0005075
 lincRNA gene Chr10:37917787-37927326 (+)
BALB/cJ MGP_BALBcJ_G0005078
 lincRNA gene Chr10:37464098-37476610 (+)
C3H/HeJ MGP_C3HHeJ_G0005027
 lincRNA gene Chr10:38247436-38257406 (+)
C57BL/6NJ MGP_C57BL6NJ_G0005228
 lincRNA gene Chr10:39603746-39615419 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0004634
 lincRNA gene Chr10:35395085-35402556 (+)
CAST/EiJ MGP_CASTEiJ_G0004974
 lincRNA gene Chr10:38416495-38426068 (+)
CBA/J MGP_CBAJ_G0005017
 lincRNA gene Chr10:41429075-41444887 (+)
DBA/2J MGP_DBA2J_G0005036
 lincRNA gene Chr10:36922140-36930634 (+)
FVB/NJ MGP_FVBNJ_G0005058
 lincRNA gene Chr10:36424793-36433450 (+)
LP/J MGP_LPJ_G0005115
 lincRNA gene Chr10:38399380-38409152 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0005041
 lincRNA gene Chr10:42281906-42292071 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0005235
 lincRNA gene Chr10:37910425-37921014 (+)
PWK/PhJ MGP_PWKPhJ_G0004925
 lincRNA gene Chr10:36765035-36773973 (+)
SPRET/EiJ MGP_SPRETEiJ_G0004850
 lincRNA gene Chr10:37717984-37726775 (+)
WSB/EiJ MGP_WSBEiJ_G0005021
 lincRNA gene Chr10:38189464-38198225 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving 4930547M16Rik
  • Find Mice (IMSR)
    0 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    6
Sequences &
Gene Models
less
  • All Sequences
    26
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000097890 Ensembl Gene Model | MGI Sequence Detail 8623 C57BL/6J ±  kb
transcript ENSMUST00000181590 Ensembl | MGI Sequence Detail 2400 Not Applicable  
polypeptide Q3TLM8 UniProt | EBI | MGI Sequence Detail 52 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 6
    cDNA 6

    Microarray probesets 1
References
more
  • Summaries
    All 17
    Phenotypes 6
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/30/2024
MGI 6.23 		The Jackson Laboratory