4930535O05Rik Gene Detail

Summary

• Symbol
  4930535O05Rik
• Name
  RIKEN cDNA 4930535O05 gene

• Feature Type
  lncRNA gene
• IDs
  MGI:1922487
  NCBI Gene: 75237
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr8:88185072-88186063 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  23 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1922487	lncRNA gene	Chr8:88185066-88186065 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0007356	lincRNA gene	Chr8:88468085-88469076 (+)
A/J	MGP_AJ_G0007353	lincRNA gene	Chr8:84995640-84996639 (+)
AKR/J	MGP_AKRJ_G0007325	lincRNA gene	Chr8:87513809-87514800 (+)
BALB/cJ	MGP_BALBcJ_G0007331	lincRNA gene	Chr8:85165938-85166929 (+)
C3H/HeJ	MGP_C3HHeJ_G0007275	lincRNA gene	Chr8:88110629-88111628 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0007502	lincRNA gene	Chr8:91827165-91828156 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0006695	lincRNA gene	Chr8:79004029-79005026 (+)
CAST/EiJ	MGP_CASTEiJ_G0007177	lincRNA gene	Chr8:87521509-87522503 (+)
CBA/J	MGP_CBAJ_G0007257	lincRNA gene	Chr8:94946263-94947254 (+)
DBA/2J	MGP_DBA2J_G0007280	lincRNA gene	Chr8:84601520-84602511 (+)
FVB/NJ	MGP_FVBNJ_G0007301	lincRNA gene	Chr8:83558234-83559225 (+)
LP/J	MGP_LPJ_G0007361	lincRNA gene	Chr8:88599853-88600844 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0007277	lincRNA gene	Chr8:97451133-97452124 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0007504	lincRNA gene	Chr8:87510453-87511444 (+)
PWK/PhJ	MGP_PWKPhJ_G0007119	lincRNA gene	Chr8:83859027-83860026 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0007026	lincRNA gene	Chr8:86292597-86293589 (+)
WSB/EiJ	MGP_WSBEiJ_G0007237	lincRNA gene	Chr8:87942339-87943337 (+)

Homology

• Gene Tree
  4930535O05Rik
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  28 phenotype references
  

• All Mutations and Alleles
  1
• Radiation induced
  1
• Genomic Mutations
  1 involving 4930535O05Rik
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000098360 (Evidence)
• NCBI Gene
  75237

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000098360	Ensembl Gene Model | MGI Sequence Detail	992	C57BL/6J
transcript	ENSMUST00000184406	Ensembl | MGI Sequence Detail	419	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 35

  Phenotypes 28
• Earliest
  J:13049 Gruneberg H, Genetical studies on the skeleton of the mouse. XVIII. Three genes for syndactylism. J Genet. 1956;54(1):113-145
• Latest
  J:282477 Baldelomar EJ, et al., In vivo measurements of kidney glomerular number and size in healthy and Os(/+) mice using MRI. Am J Physiol Renal Physiol. 2019 Oct 1;317(4):F865-F873

TSS for 4930535O05Rik:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr78593	Chr8:88185055-88185075 (+)	-7 bp